Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.1■□□□□ 0.17
KRT2P35908 AC026803.1-201ENST00000569130 274 ntBASIC16.1■□□□□ 0.17
KRT2P35908 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 MIR4754-201ENST00000582477 89 ntBASIC16.1■□□□□ 0.17
KRT2P35908 AC020922.3-201ENST00000595064 547 ntBASIC16.1■□□□□ 0.17
KRT2P35908 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT2P35908 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
KRT2P35908 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT2P35908 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.1■□□□□ 0.17
KRT2P35908 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT2P35908 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRT2P35908 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 MARK2P16-201ENST00000605714 1723 ntBASIC16.09■□□□□ 0.17
KRT2P35908 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KRT2P35908 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT2P35908 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT2P35908 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT2P35908 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT2P35908 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT2P35908 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT2P35908 AL161773.1-201ENST00000624845 863 ntBASIC16.09■□□□□ 0.17
KRT2P35908 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.09■□□□□ 0.17
KRT2P35908 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT2P35908 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT2P35908 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
KRT2P35908 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT2P35908 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT2P35908 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT2P35908 CR383656.2-201ENST00000548656 2254 ntBASIC16.08■□□□□ 0.17
KRT2P35908 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT2P35908 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.08■□□□□ 0.17
KRT2P35908 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.08■□□□□ 0.17
KRT2P35908 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT2P35908 AL031595.1-201ENST00000623969 4709 ntBASIC16.08■□□□□ 0.17
KRT2P35908 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.08■□□□□ 0.17
KRT2P35908 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
KRT2P35908 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.08■□□□□ 0.17
KRT2P35908 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT2P35908 AC020917.4-201ENST00000623994 1999 ntBASIC16.08■□□□□ 0.16
KRT2P35908 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT2P35908 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT2P35908 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT2P35908 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT2P35908 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.08■□□□□ 0.16
KRT2P35908 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms