Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARS2Q5ST30 AC090774.4-201ENST00000578888 1372 ntBASIC14.98□□□□□ -0.01
VARS2Q5ST30 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 PDXDC2P-206ENST00000534700 1315 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 BAK1P1-201ENST00000317045 636 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AC092573.1-201ENST00000433054 884 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AL022344.2-201ENST00000568976 968 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 MIR4760-201ENST00000585040 80 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AL359091.4-201ENST00000610052 409 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 AC091769.1-201ENST00000619576 568 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 AC012653.2-201ENST00000621880 420 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 AL138960.2-201ENST00000625145 535 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.97□□□□□ -0.01
VARS2Q5ST30 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARS2Q5ST30 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VARS2Q5ST30 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC068760.1-201ENST00000493579 1953 ntBASIC14.96□□□□□ -0.01
VARS2Q5ST30 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC004554.1-201ENST00000422830 1468 ntBASIC14.96□□□□□ -0.01
VARS2Q5ST30 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 AC019070.1-201ENST00000415008 1024 ntBASIC14.96□□□□□ -0.01
VARS2Q5ST30 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VARS2Q5ST30 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.96□□□□□ -0.01
VARS2Q5ST30 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms