Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.61□□□□□ -0.07
ERVFC1P60507 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
ERVFC1P60507 SNORA57-201ENST00000383870 149 ntBASIC14.61□□□□□ -0.07
ERVFC1P60507 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.61□□□□□ -0.07
ERVFC1P60507 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.61□□□□□ -0.07
ERVFC1P60507 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 BMF-206ENST00000558774 671 ntTSL 3 BASIC14.61□□□□□ -0.07
ERVFC1P60507 FTLP5-201ENST00000586853 534 ntBASIC14.61□□□□□ -0.07
ERVFC1P60507 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.61□□□□□ -0.07
ERVFC1P60507 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.61□□□□□ -0.07
ERVFC1P60507 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.61□□□□□ -0.07
ERVFC1P60507 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 AC104581.4-201ENST00000623126 3052 ntBASIC14.61□□□□□ -0.07
ERVFC1P60507 AC097359.2-201ENST00000604992 2389 ntBASIC14.61□□□□□ -0.07
ERVFC1P60507 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ERVFC1P60507 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ERVFC1P60507 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ERVFC1P60507 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ERVFC1P60507 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ERVFC1P60507 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 AC008620.2-201ENST00000510294 1569 ntBASIC14.6□□□□□ -0.07
ERVFC1P60507 NRADDP-202ENST00000641269 1585 ntBASIC14.6□□□□□ -0.07
ERVFC1P60507 CICP24-201ENST00000605464 2705 ntBASIC14.6□□□□□ -0.07
ERVFC1P60507 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.6□□□□□ -0.07
ERVFC1P60507 EEF1DP5-201ENST00000431410 772 ntBASIC14.6□□□□□ -0.07
ERVFC1P60507 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 AC113347.2-201ENST00000512350 279 ntBASIC14.6□□□□□ -0.07
ERVFC1P60507 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 KRT8P34-201ENST00000577607 1044 ntBASIC14.6□□□□□ -0.07
ERVFC1P60507 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ERVFC1P60507 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ERVFC1P60507 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.6□□□□□ -0.07
ERVFC1P60507 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ERVFC1P60507 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.59□□□□□ -0.07
ERVFC1P60507 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 RCC2P1-201ENST00000452257 1476 ntBASIC14.59□□□□□ -0.07
ERVFC1P60507 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERVFC1P60507 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.59□□□□□ -0.07
ERVFC1P60507 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms