Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 AL049840.2-201ENST00000602722 535 ntBASIC16.63■□□□□ 0.25
TNNI2P48788 AL139339.2-201ENST00000608063 657 ntBASIC16.63■□□□□ 0.25
TNNI2P48788 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.63■□□□□ 0.25
TNNI2P48788 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.63■□□□□ 0.25
TNNI2P48788 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNNI2P48788 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.63■□□□□ 0.25
TNNI2P48788 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNNI2P48788 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
TNNI2P48788 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TNNI2P48788 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNNI2P48788 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.63■□□□□ 0.25
TNNI2P48788 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNNI2P48788 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.62■□□□□ 0.25
TNNI2P48788 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TNNI2P48788 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNNI2P48788 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.62■□□□□ 0.25
TNNI2P48788 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.62■□□□□ 0.25
TNNI2P48788 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.62■□□□□ 0.25
TNNI2P48788 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.62■□□□□ 0.25
TNNI2P48788 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.62■□□□□ 0.25
TNNI2P48788 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.62■□□□□ 0.25
TNNI2P48788 TYMSP2-201ENST00000589501 424 ntBASIC16.62■□□□□ 0.25
TNNI2P48788 AP003392.6-201ENST00000607709 325 ntBASIC16.62■□□□□ 0.25
TNNI2P48788 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.62■□□□□ 0.25
TNNI2P48788 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 AC012617.1-204ENST00000586340 2305 ntBASIC16.62■□□□□ 0.25
TNNI2P48788 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNNI2P48788 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TNNI2P48788 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TNNI2P48788 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 DKKL1P1-201ENST00000400550 698 ntBASIC16.61■□□□□ 0.25
TNNI2P48788 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC16.61■□□□□ 0.25
TNNI2P48788 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNI2P48788 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.61■□□□□ 0.25
TNNI2P48788 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNI2P48788 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms