Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 MIR1307-201ENST00000408840 149 ntBASIC14.88□□□□□ -0.03
BRCC3P46736 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 PGAM1P12-201ENST00000505622 748 ntBASIC14.88□□□□□ -0.03
BRCC3P46736 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 TRMT112P3-201ENST00000580149 358 ntBASIC14.88□□□□□ -0.03
BRCC3P46736 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.88□□□□□ -0.03
BRCC3P46736 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.88□□□□□ -0.03
BRCC3P46736 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
BRCC3P46736 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.88□□□□□ -0.03
BRCC3P46736 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRCC3P46736 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.88□□□□□ -0.03
BRCC3P46736 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 AL365181.1-201ENST00000564032 1828 ntBASIC14.87□□□□□ -0.03
BRCC3P46736 FUCA1P1-201ENST00000374476 1351 ntBASIC14.87□□□□□ -0.03
BRCC3P46736 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.87□□□□□ -0.03
BRCC3P46736 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.87□□□□□ -0.03
BRCC3P46736 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.87□□□□□ -0.03
BRCC3P46736 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.87□□□□□ -0.03
BRCC3P46736 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 MIR4472-1-201ENST00000584349 80 ntBASIC14.87□□□□□ -0.03
BRCC3P46736 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
BRCC3P46736 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.87□□□□□ -0.03
BRCC3P46736 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
BRCC3P46736 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BRCC3P46736 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.87□□□□□ -0.03
BRCC3P46736 AC093462.1-201ENST00000621167 1683 ntBASIC14.87□□□□□ -0.03
BRCC3P46736 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.87□□□□□ -0.03
BRCC3P46736 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRCC3P46736 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRCC3P46736 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRCC3P46736 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms