Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RN7SL455P-201ENST00000580629 282 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC11.91□□□□□ -0.5
COL8A2P25067 SIGLEC22P-201ENST00000599104 714 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC11.91□□□□□ -0.5
COL8A2P25067 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
COL8A2P25067 AP003419.4-201ENST00000616071 517 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 AC005618.3-201ENST00000624928 458 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 AC009145.4-201ENST00000625119 1294 ntBASIC11.91□□□□□ -0.5
COL8A2P25067 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
COL8A2P25067 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
COL8A2P25067 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
COL8A2P25067 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
COL8A2P25067 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.91□□□□□ -0.5
COL8A2P25067 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 AL590824.1-201ENST00000403828 1349 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
COL8A2P25067 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC11.9□□□□□ -0.5
COL8A2P25067 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC11.9□□□□□ -0.5
COL8A2P25067 GUSBP10-201ENST00000417412 665 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 AC253536.4-201ENST00000440539 267 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 LDHBP1-201ENST00000455730 1119 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 RN7SL8P-201ENST00000461771 266 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 RPL18AP3-201ENST00000462885 528 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC11.9□□□□□ -0.5
COL8A2P25067 GOLGA2P8-201ENST00000505201 779 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 RNA5SP417-201ENST00000516459 108 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 KLF17P1-201ENST00000547105 1126 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC11.9□□□□□ -0.5
COL8A2P25067 AC005562.1-201ENST00000583030 3219 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
COL8A2P25067 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 Z82170.1-201ENST00000625081 3192 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 MST1P2-201ENST00000457982 2291 ntBASIC11.9□□□□□ -0.5
COL8A2P25067 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.9□□□□□ -0.5
COL8A2P25067 FTX-216ENST00000638985 1367 ntTSL 5 BASIC11.9□□□□□ -0.5
COL8A2P25067 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.9□□□□□ -0.5
COL8A2P25067 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
COL8A2P25067 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COL8A2P25067 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms