Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB3BP20337 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB3BP20337 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB3BP20337 DNAJB3-202ENST00000449667 1266 ntBASIC12.4□□□□□ -0.42
RAB3BP20337 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 AL512638.1-201ENST00000457493 794 ntBASIC12.4□□□□□ -0.42
RAB3BP20337 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
RAB3BP20337 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 AC123567.1-201ENST00000548294 1261 ntBASIC12.4□□□□□ -0.42
RAB3BP20337 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
RAB3BP20337 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB3BP20337 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB3BP20337 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.4□□□□□ -0.42
RAB3BP20337 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB3BP20337 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB3BP20337 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
RAB3BP20337 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RAB3BP20337 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
RAB3BP20337 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 AC022364.1-202ENST00000617468 2409 ntBASIC12.39□□□□□ -0.43
RAB3BP20337 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB3BP20337 AC003958.1-201ENST00000435883 421 ntBASIC12.39□□□□□ -0.43
RAB3BP20337 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 DUX4L27-201ENST00000554796 1261 ntBASIC12.39□□□□□ -0.43
RAB3BP20337 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 AC009486.1-201ENST00000569860 813 ntBASIC12.39□□□□□ -0.43
RAB3BP20337 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.39□□□□□ -0.43
RAB3BP20337 TMEM261P1-201ENST00000604899 340 ntBASIC12.39□□□□□ -0.43
RAB3BP20337 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 AC022400.8-201ENST00000623453 3599 ntBASIC12.39□□□□□ -0.43
RAB3BP20337 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB3BP20337 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB3BP20337 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB3BP20337 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms