Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PIN4P1-201ENST00000451079 396 ntBASIC12.77□□□□□ -0.37
FREM3P0C091 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.77□□□□□ -0.37
FREM3P0C091 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 AC092171.5-201ENST00000608012 942 ntBASIC12.77□□□□□ -0.37
FREM3P0C091 AC009560.1-201ENST00000620208 434 ntBASIC12.77□□□□□ -0.37
FREM3P0C091 COX6A1P2-201ENST00000620597 330 ntBASIC12.77□□□□□ -0.37
FREM3P0C091 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
FREM3P0C091 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.77□□□□□ -0.37
FREM3P0C091 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
FREM3P0C091 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
FREM3P0C091 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FREM3P0C091 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
FREM3P0C091 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FREM3P0C091 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.76□□□□□ -0.37
FREM3P0C091 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.76□□□□□ -0.37
FREM3P0C091 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 DNM1P30-201ENST00000563586 452 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 AL161773.1-201ENST00000624845 863 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
FREM3P0C091 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
FREM3P0C091 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
FREM3P0C091 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.76□□□□□ -0.37
FREM3P0C091 AL357563.1-201ENST00000404728 395 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 RPL17P11-201ENST00000417593 544 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 AP002803.1-201ENST00000528836 498 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 RN7SL555P-201ENST00000584742 339 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 AC087045.2-201ENST00000606279 1003 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 MIR6842-201ENST00000612539 65 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 AC072061.1-201ENST00000569710 2234 ntBASIC12.76□□□□□ -0.37
FREM3P0C091 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.76□□□□□ -0.37
FREM3P0C091 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FREM3P0C091 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
FREM3P0C091 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
FREM3P0C091 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms