Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
PKHD1P08F94 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC8.59□□□□□ -1.03
PKHD1P08F94 AC064836.1-201ENST00000405197 704 ntBASIC8.59□□□□□ -1.03
PKHD1P08F94 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC8.59□□□□□ -1.03
PKHD1P08F94 SSR3-202ENST00000463503 596 ntTSL 4 BASIC8.59□□□□□ -1.03
PKHD1P08F94 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 AC020893.2-201ENST00000506083 723 ntBASIC8.59□□□□□ -1.03
PKHD1P08F94 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC8.59□□□□□ -1.03
PKHD1P08F94 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PKHD1P08F94 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC8.59□□□□□ -1.03
PKHD1P08F94 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC8.59□□□□□ -1.03
PKHD1P08F94 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC8.59□□□□□ -1.03
PKHD1P08F94 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC8.59□□□□□ -1.03
PKHD1P08F94 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PKHD1P08F94 AC113367.3-201ENST00000508316 1912 ntBASIC8.59□□□□□ -1.04
PKHD1P08F94 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
PKHD1P08F94 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC8.59□□□□□ -1.04
PKHD1P08F94 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC8.59□□□□□ -1.04
PKHD1P08F94 SAA2-206ENST00000530400 323 ntTSL 3 BASIC8.59□□□□□ -1.04
PKHD1P08F94 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC8.59□□□□□ -1.04
PKHD1P08F94 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC8.59□□□□□ -1.04
PKHD1P08F94 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC8.59□□□□□ -1.04
PKHD1P08F94 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.04
PKHD1P08F94 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC8.59□□□□□ -1.04
PKHD1P08F94 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 FTO-214ENST00000636218 2227 ntTSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 AC093462.1-201ENST00000621167 1683 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 CACYBPP3-201ENST00000406011 625 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 AP000343.1-201ENST00000440602 385 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 HNRNPA1P30-202ENST00000440699 997 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 SLC25A5P6-201ENST00000515328 886 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 HNRNPA1P69-201ENST00000552536 933 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC8.58□□□□□ -1.04
PKHD1P08F94 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 AP000553.2-201ENST00000609038 441 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 AC024075.2-201ENST00000598112 1473 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
PKHD1P08F94 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 SERF2-205ENST00000403425 690 ntTSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 AC007690.1-201ENST00000451924 468 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 RN7SL483P-201ENST00000478417 285 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 AL109983.1-201ENST00000603234 646 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 AL117379.1-201ENST00000619319 677 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 MIR941-1-201ENST00000636396 72 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC8.58□□□□□ -1.04
PKHD1P08F94 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC8.58□□□□□ -1.04
PKHD1P08F94 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC8.58□□□□□ -1.04
PKHD1P08F94 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PKHD1P08F94 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PKHD1P08F94 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC8.57□□□□□ -1.04
PKHD1P08F94 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC8.57□□□□□ -1.04
PKHD1P08F94 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PKHD1P08F94 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms