Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 DKKL1P1-201ENST00000400550 698 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 ACTBP7-201ENST00000418351 1124 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 NME6-208ENST00000435684 599 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 NRADDP-201ENST00000437305 691 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 AC092903.1-201ENST00000466506 262 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 RN7SL147P-201ENST00000487345 298 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 AC073869.4-201ENST00000620841 800 ntBASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CCDC187A0A096LP49 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 RN7SL832P-201ENST00000607781 1756 ntBASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCDC187A0A096LP49 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 RN7SL128P-201ENST00000467883 305 ntBASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AC087203.1-201ENST00000532111 1181 ntBASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 MIR5001-201ENST00000580185 100 ntBASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCDC187A0A096LP49 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms