Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 AC245140.2-201ENST00000624054 1939 ntBASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKAL1Q5VV42 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AC008040.5-201ENST00000599781 1781 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 C8orf49-201ENST00000525043 1968 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 TUBB2BP1-201ENST00000404155 871 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 OR8T1P-201ENST00000421347 918 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 TSPY25P-201ENST00000429463 745 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AC005740.1-201ENST00000515639 522 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AC090164.2-201ENST00000611487 516 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 CICP1-201ENST00000416803 2410 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 AC020763.3-201ENST00000625095 2904 ntBASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDKAL1Q5VV42 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 Z93015.1-201ENST00000451718 390 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC104073.2-201ENST00000453737 312 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AL132994.2-201ENST00000603120 687 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC012645.4-201ENST00000610691 1061 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC009542.2-202ENST00000619004 1067 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AC004923.1-202ENST00000642106 209 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 AL365209.1-201ENST00000624418 6473 ntBASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDKAL1Q5VV42 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms