Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 KHSRPP1-201ENST00000427983 1768 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 AL591122.2-201ENST00000624125 1853 ntBASIC15.05■□□□□ -0
CTC1Q2NKJ3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTC1Q2NKJ3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CTC1Q2NKJ3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AL109809.1-201ENST00000418979 1367 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 PTGER4P2-201ENST00000328411 252 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AF274858.1-201ENST00000406288 372 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 PTGER4P3-201ENST00000458150 252 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 SNORD3B-1-201ENST00000577988 758 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AC137695.1-201ENST00000604126 489 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 AC021016.3-201ENST00000608367 477 ntBASIC15.04■□□□□ -0
CTC1Q2NKJ3 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTC1Q2NKJ3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CTC1Q2NKJ3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTC1Q2NKJ3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.03■□□□□ -0
CTC1Q2NKJ3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms