Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 RPL18P13-201ENST00000478088 569 ntBASIC13.7□□□□□ -0.22
CD97P48960 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 AC125604.1-201ENST00000496255 707 ntBASIC13.7□□□□□ -0.22
CD97P48960 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 AL160314.3-201ENST00000556041 767 ntBASIC13.7□□□□□ -0.22
CD97P48960 AC135983.4-201ENST00000564116 1262 ntBASIC13.7□□□□□ -0.22
CD97P48960 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.7□□□□□ -0.22
CD97P48960 AC138696.2-201ENST00000607376 223 ntBASIC13.7□□□□□ -0.22
CD97P48960 AC090164.2-201ENST00000611487 516 ntBASIC13.7□□□□□ -0.22
CD97P48960 MIR6756-201ENST00000616240 63 ntBASIC13.7□□□□□ -0.22
CD97P48960 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CD97P48960 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD97P48960 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 CICP1-201ENST00000416803 2410 ntBASIC13.7□□□□□ -0.22
CD97P48960 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.7□□□□□ -0.22
CD97P48960 PCDHB17P-202ENST00000623466 3066 ntBASIC13.7□□□□□ -0.22
CD97P48960 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD97P48960 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD97P48960 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 AL157791.1-201ENST00000553667 1699 ntBASIC13.69□□□□□ -0.22
CD97P48960 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.69□□□□□ -0.22
CD97P48960 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.69□□□□□ -0.22
CD97P48960 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CD97P48960 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.69□□□□□ -0.22
CD97P48960 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 FGFR3P1-201ENST00000449999 601 ntBASIC13.69□□□□□ -0.22
CD97P48960 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.69□□□□□ -0.22
CD97P48960 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 AC103988.2-201ENST00000561804 725 ntBASIC13.69□□□□□ -0.22
CD97P48960 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 AC012183.1-201ENST00000625197 499 ntBASIC13.69□□□□□ -0.22
CD97P48960 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CD97P48960 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 AL357140.3-201ENST00000639753 1983 ntBASIC13.69□□□□□ -0.22
CD97P48960 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD97P48960 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CD97P48960 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CD97P48960 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.68□□□□□ -0.22
CD97P48960 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CD97P48960 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.68□□□□□ -0.22
CD97P48960 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CD97P48960 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CD97P48960 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms