Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC27P30260 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDC27P30260 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDC27P30260 AL662890.1-201ENST00000396818 632 ntBASIC16.28■□□□□ 0.2
CDC27P30260 SLC25A24P2-201ENST00000415059 510 ntBASIC16.28■□□□□ 0.2
CDC27P30260 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC27P30260 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC27P30260 RN7SL788P-201ENST00000460504 316 ntBASIC16.28■□□□□ 0.2
CDC27P30260 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC27P30260 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.28■□□□□ 0.2
CDC27P30260 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC27P30260 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC27P30260 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC27P30260 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CDC27P30260 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 PPT1-213ENST00000641319 2388 ntBASIC16.28■□□□□ 0.2
CDC27P30260 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDC27P30260 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC27P30260 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC27P30260 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDC27P30260 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDC27P30260 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDC27P30260 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC27P30260 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC27P30260 AC126755.1-201ENST00000525846 6405 ntBASIC16.27■□□□□ 0.2
CDC27P30260 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDC27P30260 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC27P30260 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.27■□□□□ 0.2
CDC27P30260 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC27P30260 AC098934.1-203ENST00000442868 1262 ntBASIC16.27■□□□□ 0.2
CDC27P30260 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDC27P30260 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC27P30260 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.27■□□□□ 0.2
CDC27P30260 RN7SL665P-201ENST00000578793 300 ntBASIC16.27■□□□□ 0.2
CDC27P30260 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC27P30260 AC015967.2-201ENST00000624092 234 ntBASIC16.27■□□□□ 0.2
CDC27P30260 AC006435.4-201ENST00000625037 234 ntBASIC16.27■□□□□ 0.2
CDC27P30260 AL356737.1-201ENST00000634391 234 ntBASIC16.27■□□□□ 0.2
CDC27P30260 AL139424.3-202ENST00000641619 917 ntBASIC16.27■□□□□ 0.2
CDC27P30260 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.27■□□□□ 0.2
CDC27P30260 AC020917.4-201ENST00000623994 1999 ntBASIC16.27■□□□□ 0.19
CDC27P30260 AC108024.1-201ENST00000626286 1721 ntBASIC16.27■□□□□ 0.19
CDC27P30260 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC27P30260 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC27P30260 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CDC27P30260 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC27P30260 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.27■□□□□ 0.19
CDC27P30260 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC27P30260 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC27P30260 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC27P30260 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.27■□□□□ 0.19
CDC27P30260 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC27P30260 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC27P30260 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDC27P30260 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDC27P30260 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC27P30260 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CDC27P30260 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC27P30260 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC27P30260 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC27P30260 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC27P30260 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC27P30260 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms