Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.68■□□□□ 0.1
CYP3A4P08684 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.68■□□□□ 0.1
CYP3A4P08684 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC15.68■□□□□ 0.1
CYP3A4P08684 RPL35P9-201ENST00000446059 350 ntBASIC15.68■□□□□ 0.1
CYP3A4P08684 AC018463.1-201ENST00000456674 917 ntBASIC15.68■□□□□ 0.1
CYP3A4P08684 RN7SL8P-201ENST00000461771 266 ntBASIC15.68■□□□□ 0.1
CYP3A4P08684 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.68■□□□□ 0.1
CYP3A4P08684 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.68■□□□□ 0.1
CYP3A4P08684 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.68■□□□□ 0.1
CYP3A4P08684 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.68■□□□□ 0.1
CYP3A4P08684 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CYP3A4P08684 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.68■□□□□ 0.1
CYP3A4P08684 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.68■□□□□ 0.1
CYP3A4P08684 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 RN7SL736P-201ENST00000613111 269 ntBASIC15.68■□□□□ 0.1
CYP3A4P08684 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.68■□□□□ 0.1
CYP3A4P08684 AC105137.3-201ENST00000617588 984 ntBASIC15.68■□□□□ 0.1
CYP3A4P08684 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.68■□□□□ 0.1
CYP3A4P08684 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CYP3A4P08684 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CYP3A4P08684 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CYP3A4P08684 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CYP3A4P08684 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CYP3A4P08684 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 RN7SL23P-201ENST00000484055 275 ntBASIC15.67■□□□□ 0.1
CYP3A4P08684 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 AP003398.1-201ENST00000531124 318 ntBASIC15.67■□□□□ 0.1
CYP3A4P08684 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.67■□□□□ 0.1
CYP3A4P08684 MIR5572-201ENST00000583188 137 ntBASIC15.67■□□□□ 0.1
CYP3A4P08684 AC002044.2-201ENST00000624910 970 ntBASIC15.67■□□□□ 0.1
CYP3A4P08684 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.67■□□□□ 0.1
CYP3A4P08684 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.67■□□□□ 0.1
CYP3A4P08684 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CYP3A4P08684 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.66■□□□□ 0.1
CYP3A4P08684 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.66■□□□□ 0.1
CYP3A4P08684 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.66■□□□□ 0.1
CYP3A4P08684 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.66■□□□□ 0.1
CYP3A4P08684 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.66■□□□□ 0.1
CYP3A4P08684 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.66■□□□□ 0.1
CYP3A4P08684 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CYP3A4P08684 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CYP3A4P08684 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CYP3A4P08684 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CYP3A4P08684 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms