Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 AC010536.1-201ENST00000538868 2611 ntBASIC12.63□□□□□ -0.39
APOA1P02647 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.63□□□□□ -0.39
APOA1P02647 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
APOA1P02647 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
APOA1P02647 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOA1P02647 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 HTR5BP-201ENST00000430851 1154 ntBASIC12.62□□□□□ -0.39
APOA1P02647 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.62□□□□□ -0.39
APOA1P02647 HLA-V-204ENST00000476601 1289 ntBASIC12.62□□□□□ -0.39
APOA1P02647 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.62□□□□□ -0.39
APOA1P02647 GCOM2-201ENST00000509133 1104 ntBASIC12.62□□□□□ -0.39
APOA1P02647 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.62□□□□□ -0.39
APOA1P02647 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.62□□□□□ -0.39
APOA1P02647 SHC1P1-201ENST00000425230 1745 ntBASIC12.62□□□□□ -0.39
APOA1P02647 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOA1P02647 IL9RP2-201ENST00000423948 1312 ntBASIC12.62□□□□□ -0.39
APOA1P02647 LINC02486-201ENST00000604157 3000 ntBASIC12.62□□□□□ -0.39
APOA1P02647 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.61□□□□□ -0.39
APOA1P02647 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 AC104758.3-203ENST00000562938 2123 ntBASIC12.61□□□□□ -0.39
APOA1P02647 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 AL022313.4-201ENST00000562756 2046 ntBASIC12.61□□□□□ -0.39
APOA1P02647 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOA1P02647 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
APOA1P02647 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOA1P02647 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
APOA1P02647 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.61□□□□□ -0.39
APOA1P02647 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms