Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 AC072061.1-201ENST00000569710 2234 ntBASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 MARK2P16-201ENST00000605714 1723 ntBASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 AC026316.1-201ENST00000398900 414 ntBASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 AL592076.1-201ENST00000424448 303 ntBASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 GOLGA2P8-201ENST00000505201 779 ntBASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.78■□□□□ 0.12
COL4A3BPQ9Y5P4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 FGFR3P1-201ENST00000449999 601 ntBASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 ALG1L13P-202ENST00000519320 584 ntBASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 RN7SL190P-201ENST00000582519 257 ntBASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 AC103810.10-201ENST00000606504 343 ntBASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.77■□□□□ 0.12
COL4A3BPQ9Y5P4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
COL4A3BPQ9Y5P4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms