Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 KRT17P5-201ENST00000332088 839 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 RPSAP31-201ENST00000416648 895 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 AL627422.1-201ENST00000434104 580 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FTH1P22-201ENST00000456305 520 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 RN7SL8P-201ENST00000461771 266 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 NPM1P43-201ENST00000558669 786 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 AC079781.5-202ENST00000641784 3743 ntBASIC14.13□□□□□ -0.15
SPASTQ9UBP0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPASTQ9UBP0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 MIR4522-201ENST00000584932 87 ntBASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 RN7SL736P-201ENST00000613111 269 ntBASIC14.12□□□□□ -0.15
SPASTQ9UBP0 AC009560.1-201ENST00000620208 434 ntBASIC14.12□□□□□ -0.15
SPASTQ9UBP0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 LAP3P2-201ENST00000454686 1454 ntBASIC14.12□□□□□ -0.15
SPASTQ9UBP0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPASTQ9UBP0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms