Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC090568.1-201ENST00000509499 856 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 BNIP3P39-201ENST00000601077 554 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC004918.3-201ENST00000602609 925 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC005066.1-201ENST00000613582 1007 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC020658.4-201ENST00000613987 684 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC127024.7-201ENST00000625101 200 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
VARS2Q5ST30 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 PKD1P5-201ENST00000532415 10291 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VARS2Q5ST30 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC15□□□□□ -0.01
VARS2Q5ST30 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15□□□□□ -0.01
VARS2Q5ST30 AC098826.2-201ENST00000452011 651 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 RNA5SP406-201ENST00000516106 112 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15□□□□□ -0.01
VARS2Q5ST30 MIR4265-201ENST00000582152 99 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 AP005264.5-201ENST00000590066 467 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15□□□□□ -0.01
VARS2Q5ST30 LINC00244-201ENST00000625073 613 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15□□□□□ -0.01
VARS2Q5ST30 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15□□□□□ -0.01
VARS2Q5ST30 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
VARS2Q5ST30 AC020910.6-201ENST00000623084 1459 ntBASIC15□□□□□ -0.01
VARS2Q5ST30 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VARS2Q5ST30 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 AC019109.1-201ENST00000401725 1874 ntBASIC14.99□□□□□ -0.01
VARS2Q5ST30 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
VARS2Q5ST30 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARS2Q5ST30 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms