Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 INTS4P1-203ENST00000641008 3683 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.89■□□□□ 0.13
CCNA1P78396 SALL4P6-201ENST00000429385 1691 ntBASIC15.89■□□□□ 0.13
CCNA1P78396 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.89■□□□□ 0.13
CCNA1P78396 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCNA1P78396 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 HSPA8P5-201ENST00000456928 2069 ntBASIC15.88■□□□□ 0.13
CCNA1P78396 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCNA1P78396 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCNA1P78396 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC15.88■□□□□ 0.13
CCNA1P78396 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.88■□□□□ 0.13
CCNA1P78396 AL359219.1-201ENST00000556311 934 ntBASIC15.88■□□□□ 0.13
CCNA1P78396 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.88■□□□□ 0.13
CCNA1P78396 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 AL627230.2-201ENST00000613254 655 ntBASIC15.88■□□□□ 0.13
CCNA1P78396 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.88■□□□□ 0.13
CCNA1P78396 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCNA1P78396 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCNA1P78396 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCNA1P78396 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.88■□□□□ 0.13
CCNA1P78396 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.87■□□□□ 0.13
CCNA1P78396 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCNA1P78396 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.87■□□□□ 0.13
CCNA1P78396 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.87■□□□□ 0.13
CCNA1P78396 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.87■□□□□ 0.13
CCNA1P78396 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.87■□□□□ 0.13
CCNA1P78396 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCNA1P78396 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 GGTLC4P-201ENST00000402176 664 ntBASIC15.87■□□□□ 0.13
CCNA1P78396 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.87■□□□□ 0.13
CCNA1P78396 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.87■□□□□ 0.13
CCNA1P78396 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 FAM187B2P-201ENST00000577135 713 ntBASIC15.87■□□□□ 0.13
CCNA1P78396 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCNA1P78396 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.87■□□□□ 0.13
CCNA1P78396 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 AL136379.1-201ENST00000623471 2642 ntBASIC15.87■□□□□ 0.13
CCNA1P78396 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCNA1P78396 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CCNA1P78396 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 AP002414.2-201ENST00000591780 3365 ntBASIC15.87■□□□□ 0.13
CCNA1P78396 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNA1P78396 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNA1P78396 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNA1P78396 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CCNA1P78396 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CCNA1P78396 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCNA1P78396 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNA1P78396 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.86■□□□□ 0.13
CCNA1P78396 AC079250.1-201ENST00000456046 531 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms