Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLDN17P56750 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 AC061965.1-201ENST00000560524 1465 ntBASIC12.64□□□□□ -0.39
CLDN17P56750 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN17P56750 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.64□□□□□ -0.39
CLDN17P56750 AC130686.1-201ENST00000622936 2466 ntBASIC12.64□□□□□ -0.39
CLDN17P56750 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 MIR193BHG-211ENST00000641433 5365 ntBASIC12.64□□□□□ -0.39
CLDN17P56750 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLDN17P56750 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLDN17P56750 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN17P56750 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLDN17P56750 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLDN17P56750 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 MIR769-201ENST00000390225 118 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
CLDN17P56750 ACTG1P2-201ENST00000415776 1125 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 ACTG1P11-201ENST00000425411 1125 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLDN17P56750 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.63□□□□□ -0.39
CLDN17P56750 SPTLC1P5-201ENST00000450718 252 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 RN7SL11P-201ENST00000471305 293 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 RN7SL774P-201ENST00000577467 290 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.63□□□□□ -0.39
CLDN17P56750 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 RPL13AP3-202ENST00000494676 1473 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 AL139158.3-201ENST00000641212 1562 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.63□□□□□ -0.39
CLDN17P56750 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.63□□□□□ -0.39
CLDN17P56750 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLDN17P56750 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLDN17P56750 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 AC072061.1-201ENST00000569710 2234 ntBASIC12.62□□□□□ -0.39
CLDN17P56750 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.62□□□□□ -0.39
CLDN17P56750 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CLDN17P56750 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLDN17P56750 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms