Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC10.52□□□□□ -0.73
CMC4P56277 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
CMC4P56277 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CMC4P56277 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 AC012617.1-204ENST00000586340 2305 ntBASIC10.51□□□□□ -0.73
CMC4P56277 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 AL627231.1-201ENST00000394467 1125 ntBASIC10.51□□□□□ -0.73
CMC4P56277 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.51□□□□□ -0.73
CMC4P56277 OR8T1P-201ENST00000421347 918 ntBASIC10.51□□□□□ -0.73
CMC4P56277 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 AC018638.5-201ENST00000450885 754 ntBASIC10.51□□□□□ -0.73
CMC4P56277 CHCHD2P9-201ENST00000461726 456 ntBASIC10.51□□□□□ -0.73
CMC4P56277 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.51□□□□□ -0.73
CMC4P56277 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 AC138701.2-201ENST00000553634 226 ntBASIC10.51□□□□□ -0.73
CMC4P56277 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 AC103810.10-201ENST00000606504 343 ntBASIC10.51□□□□□ -0.73
CMC4P56277 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.51□□□□□ -0.73
CMC4P56277 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
CMC4P56277 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CMC4P56277 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CMC4P56277 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CMC4P56277 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CMC4P56277 MIR645-201ENST00000385283 94 ntBASIC10.5□□□□□ -0.73
CMC4P56277 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms