Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1EP49674 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CSNK1EP49674 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1EP49674 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1EP49674 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1EP49674 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.75□□□□□ -0.21
CSNK1EP49674 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.75□□□□□ -0.21
CSNK1EP49674 AC015909.5-201ENST00000624336 2266 ntBASIC13.75□□□□□ -0.21
CSNK1EP49674 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1EP49674 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1EP49674 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSNK1EP49674 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSNK1EP49674 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CSNK1EP49674 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.75□□□□□ -0.21
CSNK1EP49674 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CSNK1EP49674 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.74□□□□□ -0.21
CSNK1EP49674 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.74□□□□□ -0.21
CSNK1EP49674 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CSNK1EP49674 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CSNK1EP49674 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 USP17L6P-201ENST00000382470 1197 ntBASIC13.74□□□□□ -0.21
CSNK1EP49674 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.74□□□□□ -0.21
CSNK1EP49674 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 AL929302.1-201ENST00000426556 871 ntBASIC13.74□□□□□ -0.21
CSNK1EP49674 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.74□□□□□ -0.21
CSNK1EP49674 RN7SL351P-201ENST00000469306 248 ntBASIC13.74□□□□□ -0.21
CSNK1EP49674 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.74□□□□□ -0.21
CSNK1EP49674 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.74□□□□□ -0.21
CSNK1EP49674 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 AC005777.1-201ENST00000588332 187 ntBASIC13.74□□□□□ -0.21
CSNK1EP49674 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 HSPA8P5-201ENST00000456928 2069 ntBASIC13.74□□□□□ -0.21
CSNK1EP49674 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 AC007326.2-201ENST00000624224 7579 ntBASIC13.74□□□□□ -0.21
CSNK1EP49674 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.74□□□□□ -0.21
CSNK1EP49674 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CSNK1EP49674 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.74□□□□□ -0.21
CSNK1EP49674 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSNK1EP49674 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.74□□□□□ -0.21
CSNK1EP49674 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CSNK1EP49674 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1EP49674 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1EP49674 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1EP49674 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1EP49674 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 AC012617.1-204ENST00000586340 2305 ntBASIC13.73□□□□□ -0.21
CSNK1EP49674 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.73□□□□□ -0.21
CSNK1EP49674 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSNK1EP49674 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CSNK1EP49674 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 MIR1307-201ENST00000408840 149 ntBASIC13.73□□□□□ -0.21
CSNK1EP49674 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 ACTBP7-201ENST00000418351 1124 ntBASIC13.73□□□□□ -0.21
CSNK1EP49674 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.73□□□□□ -0.21
CSNK1EP49674 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSNK1EP49674 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.73□□□□□ -0.21
CSNK1EP49674 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CSNK1EP49674 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.73□□□□□ -0.21
CSNK1EP49674 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms