Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC073869.2-201ENST00000417338 1026 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC005077.2-201ENST00000449786 690 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 AC012618.1-201ENST00000461223 412 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC024681.1-201ENST00000521917 487 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.76□□□□□ -0.37
APOBEC1P41238 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
APOBEC1P41238 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 NDUFB10P1-201ENST00000567319 521 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.76□□□□□ -0.37
APOBEC1P41238 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.76□□□□□ -0.37
APOBEC1P41238 MEG3_2.1-201ENST00000611456 105 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC079336.7-201ENST00000623428 1078 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AL139424.3-202ENST00000641619 917 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
APOBEC1P41238 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC008620.2-201ENST00000510294 1569 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 MARK2P9-201ENST00000430958 1727 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.76□□□□□ -0.37
APOBEC1P41238 AC067931.2-201ENST00000623655 2003 ntBASIC12.76□□□□□ -0.37
APOBEC1P41238 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOBEC1P41238 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
APOBEC1P41238 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.75□□□□□ -0.37
APOBEC1P41238 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.75□□□□□ -0.37
APOBEC1P41238 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 AC026320.2-201ENST00000434379 478 ntBASIC12.75□□□□□ -0.37
APOBEC1P41238 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.75□□□□□ -0.37
APOBEC1P41238 AC073150.1-201ENST00000450406 1084 ntBASIC12.75□□□□□ -0.37
APOBEC1P41238 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.75□□□□□ -0.37
APOBEC1P41238 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.75□□□□□ -0.37
APOBEC1P41238 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.75□□□□□ -0.37
APOBEC1P41238 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOBEC1P41238 AL021707.6-201ENST00000609212 491 ntBASIC12.75□□□□□ -0.37
APOBEC1P41238 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOBEC1P41238 AP001505.2-201ENST00000616815 443 ntBASIC12.75□□□□□ -0.37
APOBEC1P41238 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms