Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 EIF4HP1-201ENST00000453115 687 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.43□□□□□ -0.1
FDFT1P37268 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 FAM86HP-204ENST00000513466 959 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.43□□□□□ -0.1
FDFT1P37268 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.43□□□□□ -0.1
FDFT1P37268 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.43□□□□□ -0.1
FDFT1P37268 AC090164.2-201ENST00000611487 516 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 SNORA50.1-201ENST00000628590 135 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 LINC01165-201ENST00000445190 1623 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.43□□□□□ -0.1
FDFT1P37268 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
FDFT1P37268 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 AL365181.3-201ENST00000605886 3222 ntBASIC14.42□□□□□ -0.1
FDFT1P37268 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.42□□□□□ -0.1
FDFT1P37268 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
FDFT1P37268 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
FDFT1P37268 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 GOLGA2P4-201ENST00000441462 777 ntBASIC14.42□□□□□ -0.1
FDFT1P37268 CHCHD2P2-201ENST00000503744 321 ntBASIC14.42□□□□□ -0.1
FDFT1P37268 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 SNORD3B-2-202ENST00000571722 791 ntBASIC14.42□□□□□ -0.1
FDFT1P37268 MIR4259-201ENST00000584466 101 ntBASIC14.42□□□□□ -0.1
FDFT1P37268 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
FDFT1P37268 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FDFT1P37268 AC118758.2-201ENST00000614242 2813 ntBASIC14.42□□□□□ -0.1
FDFT1P37268 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FDFT1P37268 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.41□□□□□ -0.1
FDFT1P37268 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 AL139385.1-201ENST00000611744 3272 ntBASIC14.41□□□□□ -0.1
FDFT1P37268 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FDFT1P37268 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 MIR658-201ENST00000385210 100 ntBASIC14.41□□□□□ -0.1
FDFT1P37268 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 TSPY25P-201ENST00000429463 745 ntBASIC14.41□□□□□ -0.1
FDFT1P37268 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms