Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL132780.4-201ENST00000624870 1135 ntBASIC11.09□□□□□ -0.63
CD28P10747 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
CD28P10747 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CD28P10747 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC11.09□□□□□ -0.63
CD28P10747 AC064801.2-201ENST00000625052 1303 ntBASIC11.09□□□□□ -0.63
CD28P10747 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CD28P10747 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CD28P10747 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CD28P10747 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.08□□□□□ -0.63
CD28P10747 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CD28P10747 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CD28P10747 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 AC090502.4-201ENST00000551714 1386 ntBASIC11.08□□□□□ -0.64
CD28P10747 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CD28P10747 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.08□□□□□ -0.64
CD28P10747 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
CD28P10747 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC11.08□□□□□ -0.64
CD28P10747 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 NEU3-207ENST00000534628 746 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.08□□□□□ -0.64
CD28P10747 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 RN7SL665P-201ENST00000578793 300 ntBASIC11.08□□□□□ -0.64
CD28P10747 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC11.08□□□□□ -0.64
CD28P10747 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC11.08□□□□□ -0.64
CD28P10747 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 AL133467.4-201ENST00000602953 725 ntBASIC11.08□□□□□ -0.64
CD28P10747 AC005041.3-201ENST00000606287 649 ntBASIC11.08□□□□□ -0.64
CD28P10747 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CD28P10747 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 AC009145.4-201ENST00000625119 1294 ntBASIC11.08□□□□□ -0.64
CD28P10747 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC11.08□□□□□ -0.64
CD28P10747 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.08□□□□□ -0.64
CD28P10747 AC015656.1-201ENST00000624209 3578 ntBASIC11.08□□□□□ -0.64
CD28P10747 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
CD28P10747 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 LINC00115-201ENST00000473798 1317 ntBASIC11.08□□□□□ -0.64
CD28P10747 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CD28P10747 AC067931.2-201ENST00000623655 2003 ntBASIC11.08□□□□□ -0.64
CD28P10747 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms