Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.87■□□□□ 0.29
POLR3DP05423 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 AC103592.1-201ENST00000394513 664 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 RPSAP31-201ENST00000416648 895 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 AL512306.1-201ENST00000432698 848 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.87■□□□□ 0.29
POLR3DP05423 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.87■□□□□ 0.29
POLR3DP05423 CHCHD2P2-201ENST00000503744 321 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.87■□□□□ 0.29
POLR3DP05423 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.87■□□□□ 0.29
POLR3DP05423 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.87■□□□□ 0.29
POLR3DP05423 NPM1P43-201ENST00000558669 786 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 HERC2P11-201ENST00000562845 725 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 AC100756.2-201ENST00000569537 736 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 MIR3180-2-201ENST00000581748 88 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 SIGLEC22P-201ENST00000599104 714 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.87■□□□□ 0.29
POLR3DP05423 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.87■□□□□ 0.29
POLR3DP05423 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
POLR3DP05423 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR3DP05423 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.87■□□□□ 0.29
POLR3DP05423 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.86■□□□□ 0.29
POLR3DP05423 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 BX679664.3-201ENST00000414070 555 ntBASIC16.86■□□□□ 0.29
POLR3DP05423 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 AC113935.1-201ENST00000471722 555 ntBASIC16.86■□□□□ 0.29
POLR3DP05423 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.86■□□□□ 0.29
POLR3DP05423 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.86■□□□□ 0.29
POLR3DP05423 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.86■□□□□ 0.29
POLR3DP05423 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
POLR3DP05423 AC025262.2-201ENST00000623975 1056 ntBASIC16.86■□□□□ 0.29
POLR3DP05423 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
POLR3DP05423 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.86■□□□□ 0.29
POLR3DP05423 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
POLR3DP05423 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
POLR3DP05423 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.85■□□□□ 0.29
POLR3DP05423 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
POLR3DP05423 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
POLR3DP05423 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR3DP05423 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms