Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 AC092862.1-201ENST00000541534 533 ntBASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RN7SL556P-201ENST00000582856 298 ntBASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCDC187A0A096LP49 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AC023908.3-201ENST00000564211 3047 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AL929302.1-201ENST00000426556 871 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 BAK1P2-201ENST00000532665 631 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 F11R-204ENST00000537746 1245 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 NAV1-210ENST00000593583 726 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AL031673.1-201ENST00000611460 466 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SNX18-202ENST00000343017 3140 ntBASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCDC187A0A096LP49 AL137784.3-201ENST00000623858 2288 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 AC011498.7-201ENST00000624986 2027 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms