Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.4□□□□□ -0.26
CDKN2CP42773 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDKN2CP42773 AC244157.2-201ENST00000616239 1006 ntBASIC13.4□□□□□ -0.26
CDKN2CP42773 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.4□□□□□ -0.26
CDKN2CP42773 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDKN2CP42773 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.4□□□□□ -0.26
CDKN2CP42773 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.4□□□□□ -0.26
CDKN2CP42773 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN2CP42773 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDKN2CP42773 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDKN2CP42773 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDKN2CP42773 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 LINC00567-201ENST00000569854 3409 ntBASIC13.39□□□□□ -0.27
CDKN2CP42773 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CDKN2CP42773 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
CDKN2CP42773 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CDKN2CP42773 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 KRT17P7-201ENST00000451704 1104 ntBASIC13.39□□□□□ -0.27
CDKN2CP42773 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.39□□□□□ -0.27
CDKN2CP42773 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.39□□□□□ -0.27
CDKN2CP42773 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.39□□□□□ -0.27
CDKN2CP42773 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 AC092299.1-201ENST00000632679 757 ntBASIC13.39□□□□□ -0.27
CDKN2CP42773 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN2CP42773 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 FMO6P-201ENST00000236166 1620 ntBASIC13.39□□□□□ -0.27
CDKN2CP42773 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN2CP42773 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN2CP42773 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDKN2CP42773 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDKN2CP42773 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.38□□□□□ -0.27
CDKN2CP42773 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.38□□□□□ -0.27
CDKN2CP42773 FAM58BP-201ENST00000439056 645 ntBASIC13.38□□□□□ -0.27
CDKN2CP42773 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.38□□□□□ -0.27
CDKN2CP42773 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 1391.9 ms