Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 TEKT4P2-202ENST00000559466 1312 ntBASIC14.31□□□□□ -0.12
XPAP23025 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 LINC01815-202ENST00000641468 1409 ntBASIC14.31□□□□□ -0.12
XPAP23025 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC14.31□□□□□ -0.12
XPAP23025 AC007952.5-201ENST00000572818 1486 ntBASIC14.31□□□□□ -0.12
XPAP23025 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
XPAP23025 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
XPAP23025 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC14.3□□□□□ -0.12
XPAP23025 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.3□□□□□ -0.12
XPAP23025 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.3□□□□□ -0.12
XPAP23025 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
XPAP23025 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 AC103592.1-201ENST00000394513 664 ntBASIC14.3□□□□□ -0.12
XPAP23025 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.3□□□□□ -0.12
XPAP23025 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.3□□□□□ -0.12
XPAP23025 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.3□□□□□ -0.12
XPAP23025 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.3□□□□□ -0.12
XPAP23025 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.3□□□□□ -0.12
XPAP23025 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 KRT8P31-201ENST00000504812 1408 ntBASIC14.3□□□□□ -0.12
XPAP23025 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.3□□□□□ -0.12
XPAP23025 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
XPAP23025 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
XPAP23025 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.29□□□□□ -0.12
XPAP23025 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.29□□□□□ -0.12
XPAP23025 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.29□□□□□ -0.12
XPAP23025 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.29□□□□□ -0.12
XPAP23025 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.29□□□□□ -0.12
XPAP23025 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 AC019193.1-201ENST00000506678 823 ntBASIC14.29□□□□□ -0.12
XPAP23025 RNA5SP423-201ENST00000517127 109 ntBASIC14.29□□□□□ -0.12
XPAP23025 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.29□□□□□ -0.12
XPAP23025 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.29□□□□□ -0.12
XPAP23025 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.29□□□□□ -0.12
XPAP23025 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.29□□□□□ -0.12
XPAP23025 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
XPAP23025 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
XPAP23025 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms