Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CCL1P22362 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 DPM3-202ENST00000368399 517 ntBASIC12.14□□□□□ -0.47
CCL1P22362 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.14□□□□□ -0.47
CCL1P22362 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 GOLGA2P4-201ENST00000441462 777 ntBASIC12.14□□□□□ -0.47
CCL1P22362 KRT223P-202ENST00000449164 1292 ntBASIC12.14□□□□□ -0.47
CCL1P22362 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 RN7SL560P-201ENST00000577943 264 ntBASIC12.14□□□□□ -0.47
CCL1P22362 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.14□□□□□ -0.47
CCL1P22362 AC007663.3-201ENST00000609632 465 ntBASIC12.14□□□□□ -0.47
CCL1P22362 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CCL1P22362 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.14□□□□□ -0.47
CCL1P22362 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CCL1P22362 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
CCL1P22362 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL1P22362 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CCL1P22362 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL1P22362 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
CCL1P22362 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.13□□□□□ -0.47
CCL1P22362 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 BX679664.3-201ENST00000414070 555 ntBASIC12.13□□□□□ -0.47
CCL1P22362 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.13□□□□□ -0.47
CCL1P22362 GPR53P-205ENST00000457298 1084 ntBASIC12.13□□□□□ -0.47
CCL1P22362 AC113935.1-201ENST00000471722 555 ntBASIC12.13□□□□□ -0.47
CCL1P22362 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL1P22362 AC106794.1-201ENST00000506935 792 ntBASIC12.13□□□□□ -0.47
CCL1P22362 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.13□□□□□ -0.47
CCL1P22362 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.13□□□□□ -0.47
CCL1P22362 MIR497HG-202ENST00000572453 3838 ntBASIC12.13□□□□□ -0.47
CCL1P22362 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 AC079336.7-201ENST00000623428 1078 ntBASIC12.13□□□□□ -0.47
CCL1P22362 AP000437.1-201ENST00000624057 2085 ntBASIC12.13□□□□□ -0.47
CCL1P22362 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 AL356585.2-201ENST00000625078 2396 ntBASIC12.13□□□□□ -0.47
CCL1P22362 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CCL1P22362 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL1P22362 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CCL1P22362 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms