Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.37■□□□□ 0.21
ATP2B1P20020 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.37■□□□□ 0.21
ATP2B1P20020 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.37■□□□□ 0.21
ATP2B1P20020 XBP1P1-201ENST00000436573 652 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.37■□□□□ 0.21
ATP2B1P20020 AC126915.1-201ENST00000522847 1038 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 AC140658.4-201ENST00000561990 352 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.37■□□□□ 0.21
ATP2B1P20020 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.37■□□□□ 0.21
ATP2B1P20020 BAP1-211ENST00000615113 489 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ATP2B1P20020 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 AC027612.1-201ENST00000445234 2395 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ATP2B1P20020 AHCYP4-201ENST00000419201 1315 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP2B1P20020 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP2B1P20020 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 AC005562.1-201ENST00000583030 3219 ntBASIC16.37■□□□□ 0.21
ATP2B1P20020 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ATP2B1P20020 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP2B1P20020 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.37■□□□□ 0.21
ATP2B1P20020 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP2B1P20020 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP2B1P20020 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP2B1P20020 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.36■□□□□ 0.21
ATP2B1P20020 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.36■□□□□ 0.21
ATP2B1P20020 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.36■□□□□ 0.21
ATP2B1P20020 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.36■□□□□ 0.21
ATP2B1P20020 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.36■□□□□ 0.21
ATP2B1P20020 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.36■□□□□ 0.21
ATP2B1P20020 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
ATP2B1P20020 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATP2B1P20020 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP2B1P20020 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ATP2B1P20020 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
ATP2B1P20020 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP2B1P20020 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP2B1P20020 AC099521.3-201ENST00000624251 2938 ntBASIC16.35■□□□□ 0.21
ATP2B1P20020 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms