Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.52■□□□□ 0.08
CLTAP09496 RHOQP1-201ENST00000555758 579 ntBASIC15.52■□□□□ 0.08
CLTAP09496 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.52■□□□□ 0.08
CLTAP09496 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CLTAP09496 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLTAP09496 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.52■□□□□ 0.07
CLTAP09496 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.52■□□□□ 0.07
CLTAP09496 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.52■□□□□ 0.07
CLTAP09496 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CLTAP09496 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
CLTAP09496 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLTAP09496 KRT8P31-201ENST00000504812 1408 ntBASIC15.51■□□□□ 0.07
CLTAP09496 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.51■□□□□ 0.07
CLTAP09496 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 OR2K2-202ENST00000374428 1038 ntBASIC15.51■□□□□ 0.07
CLTAP09496 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.51■□□□□ 0.07
CLTAP09496 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.51■□□□□ 0.07
CLTAP09496 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 OR8T1P-201ENST00000421347 918 ntBASIC15.51■□□□□ 0.07
CLTAP09496 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.51■□□□□ 0.07
CLTAP09496 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.51■□□□□ 0.07
CLTAP09496 AC114947.1-202ENST00000514136 344 ntBASIC15.51■□□□□ 0.07
CLTAP09496 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CLTAP09496 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.51■□□□□ 0.07
CLTAP09496 MIR3907-201ENST00000579424 151 ntBASIC15.51■□□□□ 0.07
CLTAP09496 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.51■□□□□ 0.07
CLTAP09496 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.51■□□□□ 0.07
CLTAP09496 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLTAP09496 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLTAP09496 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLTAP09496 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLTAP09496 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLTAP09496 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.51■□□□□ 0.07
CLTAP09496 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.5■□□□□ 0.07
CLTAP09496 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.5■□□□□ 0.07
CLTAP09496 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.5■□□□□ 0.07
CLTAP09496 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.5■□□□□ 0.07
CLTAP09496 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.5■□□□□ 0.07
CLTAP09496 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 AC103592.1-201ENST00000394513 664 ntBASIC15.5■□□□□ 0.07
CLTAP09496 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.5■□□□□ 0.07
CLTAP09496 CEP164P1-201ENST00000455142 418 ntBASIC15.5■□□□□ 0.07
CLTAP09496 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLTAP09496 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.5■□□□□ 0.07
CLTAP09496 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.5■□□□□ 0.07
CLTAP09496 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.5■□□□□ 0.07
CLTAP09496 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms