Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 SALL4P6-201ENST00000429385 1691 ntBASIC16.86■□□□□ 0.29
CHGBP05060 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.86■□□□□ 0.29
CHGBP05060 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.86■□□□□ 0.29
CHGBP05060 AL592076.1-201ENST00000424448 303 ntBASIC16.86■□□□□ 0.29
CHGBP05060 RN7SL181P-201ENST00000462921 277 ntBASIC16.86■□□□□ 0.29
CHGBP05060 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.86■□□□□ 0.29
CHGBP05060 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 TMCO5B-205ENST00000530020 894 ntBASIC16.86■□□□□ 0.29
CHGBP05060 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CHGBP05060 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHGBP05060 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHGBP05060 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHGBP05060 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.85■□□□□ 0.29
CHGBP05060 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.85■□□□□ 0.29
CHGBP05060 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.85■□□□□ 0.29
CHGBP05060 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 EGLN3-205ENST00000547327 2849 ntBASIC16.85■□□□□ 0.29
CHGBP05060 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.85■□□□□ 0.29
CHGBP05060 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHGBP05060 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHGBP05060 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.85■□□□□ 0.29
CHGBP05060 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.85■□□□□ 0.29
CHGBP05060 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHGBP05060 HLA-DMA-203ENST00000395305 777 ntBASIC16.85■□□□□ 0.29
CHGBP05060 GUSBP10-201ENST00000417412 665 ntBASIC16.85■□□□□ 0.29
CHGBP05060 EEF1DP2-201ENST00000433698 843 ntBASIC16.85■□□□□ 0.29
CHGBP05060 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CHGBP05060 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.85■□□□□ 0.29
CHGBP05060 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.85■□□□□ 0.29
CHGBP05060 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.85■□□□□ 0.29
CHGBP05060 MIR4265-201ENST00000582152 99 ntBASIC16.85■□□□□ 0.29
CHGBP05060 RN7SL555P-201ENST00000584742 339 ntBASIC16.85■□□□□ 0.29
CHGBP05060 SIGLEC22P-201ENST00000599104 714 ntBASIC16.85■□□□□ 0.29
CHGBP05060 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.85■□□□□ 0.29
CHGBP05060 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.85■□□□□ 0.29
CHGBP05060 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.85■□□□□ 0.29
CHGBP05060 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.85■□□□□ 0.29
CHGBP05060 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.85■□□□□ 0.29
CHGBP05060 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.85■□□□□ 0.29
CHGBP05060 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
CHGBP05060 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHGBP05060 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 NCLP1-201ENST00000445357 1963 ntBASIC16.84■□□□□ 0.29
CHGBP05060 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHGBP05060 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.84■□□□□ 0.29
CHGBP05060 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms