Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD3DP04234 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD3DP04234 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.02□□□□□ -0.48
CD3DP04234 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD3DP04234 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD3DP04234 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CD3DP04234 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CD3DP04234 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.02□□□□□ -0.49
CD3DP04234 AC003958.1-201ENST00000435883 421 ntBASIC12.02□□□□□ -0.49
CD3DP04234 CICP12-201ENST00000455801 843 ntBASIC12.02□□□□□ -0.49
CD3DP04234 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 AC093433.1-201ENST00000458048 571 ntBASIC12.02□□□□□ -0.49
CD3DP04234 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CD3DP04234 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 AC092552.1-201ENST00000547243 906 ntBASIC12.02□□□□□ -0.49
CD3DP04234 AP001063.1-201ENST00000568332 529 ntBASIC12.02□□□□□ -0.49
CD3DP04234 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 AC133539.2-201ENST00000604757 467 ntBASIC12.02□□□□□ -0.49
CD3DP04234 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CD3DP04234 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.02□□□□□ -0.49
CD3DP04234 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.02□□□□□ -0.49
CD3DP04234 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD3DP04234 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.02□□□□□ -0.49
CD3DP04234 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.01□□□□□ -0.49
CD3DP04234 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 SNORA50C-201ENST00000408535 133 ntBASIC12.01□□□□□ -0.49
CD3DP04234 HMGA1P1-201ENST00000415560 1062 ntBASIC12.01□□□□□ -0.49
CD3DP04234 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.01□□□□□ -0.49
CD3DP04234 AC022137.2-201ENST00000503482 481 ntBASIC12.01□□□□□ -0.49
CD3DP04234 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD3DP04234 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.01□□□□□ -0.49
CD3DP04234 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CD3DP04234 CLUHP6-201ENST00000580789 941 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms