Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
UPK2O00526 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 AL139158.3-201ENST00000641212 1562 ntBASIC11.37□□□□□ -0.59
UPK2O00526 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
UPK2O00526 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.37□□□□□ -0.59
UPK2O00526 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
UPK2O00526 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.37□□□□□ -0.59
UPK2O00526 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.37□□□□□ -0.59
UPK2O00526 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
UPK2O00526 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 AC005225.4-201ENST00000557330 545 ntBASIC11.37□□□□□ -0.59
UPK2O00526 RAB43P1-201ENST00000561790 589 ntBASIC11.37□□□□□ -0.59
UPK2O00526 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 AP000346.4-201ENST00000614827 381 ntBASIC11.37□□□□□ -0.59
UPK2O00526 AC092299.1-201ENST00000632679 757 ntBASIC11.37□□□□□ -0.59
UPK2O00526 NUTM2HP-201ENST00000442076 2498 ntBASIC11.37□□□□□ -0.59
UPK2O00526 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.37□□□□□ -0.59
UPK2O00526 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UPK2O00526 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UPK2O00526 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 AC073869.1-201ENST00000415574 2762 ntBASIC11.36□□□□□ -0.59
UPK2O00526 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 AL445250.1-201ENST00000641671 2259 ntBASIC11.36□□□□□ -0.59
UPK2O00526 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 SNORA50C-201ENST00000408535 133 ntBASIC11.36□□□□□ -0.59
UPK2O00526 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.36□□□□□ -0.59
UPK2O00526 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 YBX1P6-201ENST00000442962 1002 ntBASIC11.36□□□□□ -0.59
UPK2O00526 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 RPL18P13-201ENST00000478088 569 ntBASIC11.36□□□□□ -0.59
UPK2O00526 AC021723.1-201ENST00000486306 515 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms