Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 TCAM1P-207ENST00000485295 1537 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 RPL7P35-201ENST00000446943 740 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 CHCHD2P9-201ENST00000461726 456 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 RN7SL8P-201ENST00000461771 266 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AC104784.1-201ENST00000473096 294 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 ALG1L13P-202ENST00000519320 584 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 KRT8P1-201ENST00000557533 1207 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AC007881.3-201ENST00000608897 607 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AC104506.1-201ENST00000609247 429 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AC087392.5-201ENST00000612517 489 ntBASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPA3F8WFD2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 LAP3P2-201ENST00000454686 1454 ntBASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NPIPA3F8WFD2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms