Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ERGIC3Q9Y282 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 CR559946.2-201ENST00000623684 991 ntBASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.45■□□□□ 0.86
ERGIC3Q9Y282 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ERGIC3Q9Y282 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERGIC3Q9Y282 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 AL161729.1-201ENST00000604104 1402 ntBASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERGIC3Q9Y282 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 RP9P-202ENST00000450133 1212 ntBASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 ZNRF2P2-203ENST00000454624 420 ntBASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERGIC3Q9Y282 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERGIC3Q9Y282 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ERGIC3Q9Y282 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ERGIC3Q9Y282 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ERGIC3Q9Y282 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 AC060814.1-201ENST00000554326 538 ntBASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
ERGIC3Q9Y282 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms