Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USB1Q9BQ65 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USB1Q9BQ65 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.9■□□□□ 0.78
USB1Q9BQ65 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.9■□□□□ 0.78
USB1Q9BQ65 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
USB1Q9BQ65 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USB1Q9BQ65 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USB1Q9BQ65 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USB1Q9BQ65 MIR638-201ENST00000385237 100 ntBASIC19.89■□□□□ 0.77
USB1Q9BQ65 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.89■□□□□ 0.77
USB1Q9BQ65 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.89■□□□□ 0.77
USB1Q9BQ65 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.89■□□□□ 0.77
USB1Q9BQ65 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USB1Q9BQ65 AL139125.2-201ENST00000623134 1869 ntBASIC19.88■□□□□ 0.77
USB1Q9BQ65 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USB1Q9BQ65 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USB1Q9BQ65 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USB1Q9BQ65 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USB1Q9BQ65 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USB1Q9BQ65 ALDH1A3-203ENST00000557963 1670 ntBASIC19.87■□□□□ 0.77
USB1Q9BQ65 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USB1Q9BQ65 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USB1Q9BQ65 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USB1Q9BQ65 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USB1Q9BQ65 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
USB1Q9BQ65 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USB1Q9BQ65 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USB1Q9BQ65 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USB1Q9BQ65 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 AC106739.1-201ENST00000617035 715 ntBASIC19.86■□□□□ 0.77
USB1Q9BQ65 AC110285.6-201ENST00000617652 491 ntBASIC19.86■□□□□ 0.77
USB1Q9BQ65 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USB1Q9BQ65 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.86■□□□□ 0.77
USB1Q9BQ65 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.85■□□□□ 0.77
USB1Q9BQ65 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
USB1Q9BQ65 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 AL138724.1-201ENST00000606771 1088 ntBASIC19.85■□□□□ 0.77
USB1Q9BQ65 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
USB1Q9BQ65 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USB1Q9BQ65 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.84■□□□□ 0.77
USB1Q9BQ65 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USB1Q9BQ65 AC009102.2-201ENST00000606772 1639 ntBASIC19.84■□□□□ 0.77
USB1Q9BQ65 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.83■□□□□ 0.77
USB1Q9BQ65 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.83■□□□□ 0.77
USB1Q9BQ65 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USB1Q9BQ65 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
USB1Q9BQ65 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
USB1Q9BQ65 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
USB1Q9BQ65 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USB1Q9BQ65 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
USB1Q9BQ65 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
USB1Q9BQ65 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USB1Q9BQ65 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.83■□□□□ 0.76
USB1Q9BQ65 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USB1Q9BQ65 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
USB1Q9BQ65 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USB1Q9BQ65 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms