Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 PMC1YGL006W 3522 nt3.64□□□□□ -1.83
ATG40Q99325 ALG2YGL065C 1512 nt3.64□□□□□ -1.83
ATG40Q99325 SSH4YKL124W 1740 nt3.64□□□□□ -1.83
ATG40Q99325 DPH6YLR143W 2058 nt3.63□□□□□ -1.83
ATG40Q99325 ADP1YCR011C 3150 nt3.63□□□□□ -1.83
ATG40Q99325 YGR122WYGR122W 1209 nt3.63□□□□□ -1.83
ATG40Q99325 YNL217WYNL217W 981 nt3.63□□□□□ -1.83
ATG40Q99325 YNL228WYNL228W 777 nt3.63□□□□□ -1.83
ATG40Q99325 SAF1YBR280C 1914 nt3.63□□□□□ -1.83
ATG40Q99325 YEH2YLR020C 1617 nt3.62□□□□□ -1.83
ATG40Q99325 GCR2YNL199C 1605 nt3.62□□□□□ -1.83
ATG40Q99325 TOG1YER184C 2385 nt3.62□□□□□ -1.83
ATG40Q99325 ERG4YGL012W 1422 nt3.62□□□□□ -1.83
ATG40Q99325 YEL053W-AYEL053W-A 348 nt3.62□□□□□ -1.83
ATG40Q99325 RPL24AYGL031C 468 nt3.62□□□□□ -1.83
ATG40Q99325 TRS85YDR108W 2097 nt3.62□□□□□ -1.83
ATG40Q99325 NHX1YDR456W 1902 nt3.62□□□□□ -1.83
ATG40Q99325 CEG1YGL130W 1380 nt3.62□□□□□ -1.83
ATG40Q99325 SVF1YDR346C 1446 nt3.61□□□□□ -1.83
ATG40Q99325 PCL8YPL219W 1479 nt3.61□□□□□ -1.83
ATG40Q99325 GCR1YPL075W 2358 nt3.61□□□□□ -1.83
ATG40Q99325 LAS1YKR063C 1509 nt3.61□□□□□ -1.83
ATG40Q99325 PEX30YLR324W 1572 nt3.61□□□□□ -1.83
ATG40Q99325 COQ4YDR204W 1008 nt3.61□□□□□ -1.83
ATG40Q99325 RAD27YKL113C 1149 nt3.61□□□□□ -1.83
ATG40Q99325 CNB1YKL190W 528 nt3.61□□□□□ -1.83
ATG40Q99325 YLR407WYLR407W 687 nt3.61□□□□□ -1.83
ATG40Q99325 MTF1YMR228W 1026 nt3.61□□□□□ -1.83
ATG40Q99325 YMR315WYMR315W 1050 nt3.61□□□□□ -1.83
ATG40Q99325 YPL077CYPL077C 723 nt3.61□□□□□ -1.83
ATG40Q99325 STE12YHR084W 2067 nt3.61□□□□□ -1.83
ATG40Q99325 RPO21YDL140C 5202 nt3.61□□□□□ -1.83
ATG40Q99325 HOYDL227C 1761 nt3.61□□□□□ -1.83
ATG40Q99325 GSM1YJL103C 1857 nt3.6□□□□□ -1.83
ATG40Q99325 SIS2YKR072C 1689 nt3.6□□□□□ -1.83
ATG40Q99325 YDL094CYDL094C 510 nt3.6□□□□□ -1.83
ATG40Q99325 FRA2YGL220W 363 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)CtQ(UUG)C 72 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)D1tQ(UUG)D1 72 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)D2tQ(UUG)D2 72 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)D3tQ(UUG)D3 72 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)E1tQ(UUG)E1 72 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)HtQ(UUG)H 72 nt3.6□□□□□ -1.83
ATG40Q99325 tQ(UUG)LtQ(UUG)L 72 nt3.6□□□□□ -1.83
ATG40Q99325 ISY1YJR050W 708 nt3.6□□□□□ -1.83
ATG40Q99325 NKP2YLR315W 462 nt3.6□□□□□ -1.83
ATG40Q99325 RPP0YLR340W 939 nt3.6□□□□□ -1.83
ATG40Q99325 SMA1YPL027W 738 nt3.6□□□□□ -1.83
ATG40Q99325 PBN1YCL052C 1251 nt3.6□□□□□ -1.83
ATG40Q99325 RFT1YBL020W 1725 nt3.6□□□□□ -1.83
ATG40Q99325 TGL4YKR089C 2733 nt3.6□□□□□ -1.83
ATG40Q99325 LCB2YDR062W 1686 nt3.59□□□□□ -1.83
ATG40Q99325 OCA4YCR095C 1089 nt3.59□□□□□ -1.83
ATG40Q99325 HST4YDR191W 1113 nt3.59□□□□□ -1.83
ATG40Q99325 RFC2YJR068W 1062 nt3.59□□□□□ -1.83
ATG40Q99325 FMP46YKR049C 402 nt3.59□□□□□ -1.83
ATG40Q99325 YLR364C-AYLR364C-A 123 nt3.59□□□□□ -1.83
ATG40Q99325 VPS68YOL129W 555 nt3.59□□□□□ -1.83
ATG40Q99325 RAD1YPL022W 3303 nt3.59□□□□□ -1.83
ATG40Q99325 YPK9YOR291W 4419 nt3.59□□□□□ -1.84
ATG40Q99325 FLO8YER109C 2400 nt3.59□□□□□ -1.84
ATG40Q99325 MNN4YKL201C 3537 nt3.58□□□□□ -1.84
ATG40Q99325 MIS1YBR084W 2928 nt3.58□□□□□ -1.84
ATG40Q99325 THI13YDL244W 1023 nt3.58□□□□□ -1.84
ATG40Q99325 PAD1YDR538W 729 nt3.58□□□□□ -1.84
ATG40Q99325 YGR269WYGR269W 327 nt3.58□□□□□ -1.84
ATG40Q99325 THI11YJR156C 1023 nt3.58□□□□□ -1.84
ATG40Q99325 ECM1YAL059W 639 nt3.58□□□□□ -1.84
ATG40Q99325 NMD4YLR363C 657 nt3.58□□□□□ -1.84
ATG40Q99325 CUZ1YNL155W 825 nt3.58□□□□□ -1.84
ATG40Q99325 YNG1YOR064C 660 nt3.58□□□□□ -1.84
ATG40Q99325 NAT5YOR253W 531 nt3.58□□□□□ -1.84
ATG40Q99325 YPL278CYPL278C 303 nt3.58□□□□□ -1.84
ATG40Q99325 OPY2YPR075C 1083 nt3.58□□□□□ -1.84
ATG40Q99325 IZH3YLR023C 1632 nt3.58□□□□□ -1.84
ATG40Q99325 AVT1YJR001W 1809 nt3.58□□□□□ -1.84
ATG40Q99325 SUL2YLR092W 2682 nt3.57□□□□□ -1.84
ATG40Q99325 RXT3YDL076C 885 nt3.57□□□□□ -1.84
ATG40Q99325 CNL1YDR357C 369 nt3.57□□□□□ -1.84
ATG40Q99325 NUG1YER006W 1563 nt3.57□□□□□ -1.84
ATG40Q99325 VPS73YGL104C 1461 nt3.57□□□□□ -1.84
ATG40Q99325 ATG1YGL180W 2694 nt3.57□□□□□ -1.84
ATG40Q99325 BIO2YGR286C 1128 nt3.57□□□□□ -1.84
ATG40Q99325 ORC6YHR118C 1308 nt3.57□□□□□ -1.84
ATG40Q99325 MET3YJR010W 1536 nt3.57□□□□□ -1.84
ATG40Q99325 RDN5-1RDN5-1 121 nt3.57□□□□□ -1.84
ATG40Q99325 RDN5-6RDN5-6 121 nt3.57□□□□□ -1.84
ATG40Q99325 BUD8YLR353W 1812 nt3.57□□□□□ -1.84
ATG40Q99325 YML031C-AYML031C-A 336 nt3.57□□□□□ -1.84
ATG40Q99325 YML119WYML119W 1074 nt3.57□□□□□ -1.84
ATG40Q99325 SPS18YNL204C 903 nt3.57□□□□□ -1.84
ATG40Q99325 LYP1YNL268W 1836 nt3.57□□□□□ -1.84
ATG40Q99325 ULS1YOR191W 4860 nt3.57□□□□□ -1.84
ATG40Q99325 PHM7YOL084W 2976 nt3.57□□□□□ -1.84
ATG40Q99325 PRP40YKL012W 1752 nt3.56□□□□□ -1.84
ATG40Q99325 FAR10YLR238W 1437 nt3.56□□□□□ -1.84
ATG40Q99325 UPC2YDR213W 2742 nt3.56□□□□□ -1.84
ATG40Q99325 MAC1YMR021C 1254 nt3.56□□□□□ -1.84
ATG40Q99325 RRN9YMR270C 1098 nt3.56□□□□□ -1.84
ATG40Q99325 MED4YOR174W 855 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms