RNA–Protein interactions for RNA: YPL022W

RAD1, Transcript of Single-stranded DNA endonuclease (with Rad10p), yeast

Gene RAD1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD1	YPL022W	BFR2	Q06631	534 aa	Known RBP	6.42	□□□□□ -1.38
RAD1	YPL022W	RQC2	Q12532	1038 aa	Known RBP	6.41	□□□□□ -1.38
RAD1	YPL022W	NOP2	P40991	618 aa	Known RBP	6.05	□□□□□ -1.44
RAD1	YPL022W	CAB3	P36076	571 aa		5.9	□□□□□ -1.47
RAD1	YPL022W	EBP2	P36049	427 aa	Known RBP	5.86	□□□□□ -1.47
RAD1	YPL022W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
RAD1	YPL022W	URN1	Q06525	465 aa	Known RBP	5.71	□□□□□ -1.5
RAD1	YPL022W	SIS2	P36024	562 aa		5.69	□□□□□ -1.5
RAD1	YPL022W	YPR148C	Q06523	435 aa		5.64	□□□□□ -1.51
RAD1	YPL022W	AVT3	P36062	692 aa		5.56	□□□□□ -1.52
RAD1	YPL022W	SKI3	P17883	1432 aa	Known RBP	5.54	□□□□□ -1.52
RAD1	YPL022W	TAF7	Q05021	590 aa		5.52	□□□□□ -1.53
RAD1	YPL022W	SPA2	P23201	1466 aa	Known RBP	5.52	□□□□□ -1.53
RAD1	YPL022W	YFR016C	P43597	1233 aa	Known RBP	5.49	□□□□□ -1.53
RAD1	YPL022W	MNN4	P36044	1178 aa		5.46	□□□□□ -1.54
RAD1	YPL022W	DRS1	P32892	752 aa	Known RBP	5.45	□□□□□ -1.54
RAD1	YPL022W	ENP1	P38333	483 aa	Known RBP	5.45	□□□□□ -1.54
RAD1	YPL022W	SSN2	P38931	1420 aa		5.44	□□□□□ -1.54
RAD1	YPL022W	SGS1	P35187	1447 aa		5.42	□□□□□ -1.54
RAD1	YPL022W	AIM44	Q99299	758 aa		5.41	□□□□□ -1.54
RAD1	YPL022W	LEO1	P38439	464 aa		5.4	□□□□□ -1.54
RAD1	YPL022W	RPS0B	P46654	252 aa	Known RBP	5.4	□□□□□ -1.54
RAD1	YPL022W	TCB2	P48231	1178 aa		5.39	□□□□□ -1.55
RAD1	YPL022W	CWC22	P53333	577 aa	Known RBP	5.37	□□□□□ -1.55
RAD1	YPL022W	CLC1	P17891	233 aa		5.33	□□□□□ -1.56
RAD1	YPL022W	RSE1	Q04693	1361 aa	Known RBP	5.29	□□□□□ -1.56
RAD1	YPL022W	TCB3	Q03640	1545 aa	Known RBP	5.29	□□□□□ -1.56
RAD1	YPL022W	SEC3	P33332	1336 aa	Known RBP	5.29	□□□□□ -1.56
RAD1	YPL022W	POL5	P39985	1022 aa	Known RBP	5.28	□□□□□ -1.56
RAD1	YPL022W	KRI1	P42846	591 aa	Known RBP	5.28	□□□□□ -1.56
RAD1	YPL022W	DIP2	Q12220	943 aa	Predicted RBP	5.28	□□□□□ -1.56
RAD1	YPL022W	QCR6	P00127	147 aa		5.28	□□□□□ -1.56
RAD1	YPL022W	SPT7	P35177	1332 aa		5.27	□□□□□ -1.57
RAD1	YPL022W	FPR3	P38911	411 aa	Known RBP	5.26	□□□□□ -1.57
RAD1	YPL022W	TFA1	P36100	482 aa		5.25	□□□□□ -1.57
RAD1	YPL022W	IME2	P32581	645 aa		5.25	□□□□□ -1.57
RAD1	YPL022W	EAF7	P53911	425 aa	Known RBP	5.25	□□□□□ -1.57
RAD1	YPL022W	DEF1	P35732	738 aa	Known RBP	5.25	□□□□□ -1.57
RAD1	YPL022W	RNA1	P11745	407 aa	Known RBP	5.24	□□□□□ -1.57
RAD1	YPL022W	ENV11	P53246	860 aa		5.24	□□□□□ -1.57
RAD1	YPL022W	STH1	P32597	1359 aa		5.23	□□□□□ -1.57
RAD1	YPL022W	PRS1	P32895	427 aa	Known RBP	5.23	□□□□□ -1.57
RAD1	YPL022W	YRB30	P53107	440 aa	Predicted RBP	5.22	□□□□□ -1.57
RAD1	YPL022W	SAS10	Q12136	610 aa	Predicted RBP	5.22	□□□□□ -1.57
RAD1	YPL022W	YGR130C	P53278	816 aa		5.21	□□□□□ -1.58
RAD1	YPL022W	LEU3	P08638	886 aa		5.2	□□□□□ -1.58
RAD1	YPL022W	SPT21	P35209	758 aa		5.2	□□□□□ -1.58
RAD1	YPL022W	NUG1	P40010	520 aa	Known RBP	5.2	□□□□□ -1.58
RAD1	YPL022W	FPR4	Q06205	392 aa	Predicted RBP	5.19	□□□□□ -1.58
RAD1	YPL022W	PSH1	Q12161	406 aa		5.18	□□□□□ -1.58
RAD1	YPL022W	MMS22	Q06164	1454 aa		5.18	□□□□□ -1.58
RAD1	YPL022W	NOP53	Q12080	455 aa	Known RBP	5.18	□□□□□ -1.58
RAD1	YPL022W	RLF2	Q12495	606 aa		5.18	□□□□□ -1.58
RAD1	YPL022W	RPC31	P17890	251 aa		5.16	□□□□□ -1.58
RAD1	YPL022W	FUN12	P39730	1002 aa	Known RBP	5.16	□□□□□ -1.58
RAD1	YPL022W	SPT2	P06843	333 aa	Predicted RBP	5.15	□□□□□ -1.59
RAD1	YPL022W	OPY1	P38271	328 aa		5.15	□□□□□ -1.59
RAD1	YPL022W	CFT1	Q06632	1357 aa	Known RBP	5.14	□□□□□ -1.59
RAD1	YPL022W	UFD4	P33202	1483 aa		5.12	□□□□□ -1.59
RAD1	YPL022W	RIX1	P38883	763 aa	Predicted RBP	5.12	□□□□□ -1.59
RAD1	YPL022W	SPP41	P38904	1435 aa		5.12	□□□□□ -1.59
RAD1	YPL022W	PAF1	P38351	445 aa		5.12	□□□□□ -1.59
RAD1	YPL022W	SNF7	P39929	240 aa	Known RBP	5.11	□□□□□ -1.59
RAD1	YPL022W	RTT106	P40161	455 aa		5.11	□□□□□ -1.59
RAD1	YPL022W	NAP1	P25293	417 aa	Known RBP	5.1	□□□□□ -1.59
RAD1	YPL022W	XRN1	P22147	1528 aa	Known RBP	5.09	□□□□□ -1.59
RAD1	YPL022W	MTC1	P47018	478 aa	Known RBP	5.09	□□□□□ -1.59
RAD1	YPL022W	IKI3	Q06706	1349 aa	Known RBP	5.08	□□□□□ -1.6
RAD1	YPL022W	CHD1	P32657	1468 aa		5.08	□□□□□ -1.6
RAD1	YPL022W	NOP58	Q12499	511 aa	Known RBP	5.08	□□□□□ -1.6
RAD1	YPL022W	ECM5	Q03214	1411 aa		5.07	□□□□□ -1.6
RAD1	YPL022W	SPC110	P32380	944 aa		5.07	□□□□□ -1.6
RAD1	YPL022W	NMD2	P38798	1089 aa	Known RBP	5.07	□□□□□ -1.6
RAD1	YPL022W	RAD26	P40352	1085 aa		5.07	□□□□□ -1.6
RAD1	YPL022W	SWE1	P32944	819 aa		5.07	□□□□□ -1.6
RAD1	YPL022W	TRM732	Q03496	1420 aa		5.06	□□□□□ -1.6
RAD1	YPL022W	ROX1	P25042	368 aa		5.05	□□□□□ -1.6
RAD1	YPL022W	CTR9	P89105	1077 aa		5.05	□□□□□ -1.6
RAD1	YPL022W	RLP24	Q07915	199 aa	Known RBP	5.05	□□□□□ -1.6
RAD1	YPL022W	YPP1	P46951	817 aa		5.05	□□□□□ -1.6
RAD1	YPL022W	DOS2	P54858	310 aa		5.05	□□□□□ -1.6
RAD1	YPL022W	HSP82	P02829	709 aa	Known RBP	5.04	□□□□□ -1.6
RAD1	YPL022W	INO80	P53115	1489 aa		5.04	□□□□□ -1.6
RAD1	YPL022W	DJP1	P40564	432 aa		5.03	□□□□□ -1.6
RAD1	YPL022W	PSD2	P53037	1138 aa	Known RBP	5.03	□□□□□ -1.6
RAD1	YPL022W	YTA7	P40340	1379 aa		5.03	□□□□□ -1.6
RAD1	YPL022W	SMC3	P47037	1230 aa		5.02	□□□□□ -1.61
RAD1	YPL022W	SLN1	P39928	1220 aa	Predicted RBP	5.02	□□□□□ -1.61
RAD1	YPL022W	BUD4	P47136	1447 aa		5.02	□□□□□ -1.61
RAD1	YPL022W	YNL011C	P53980	444 aa		5.01	□□□□□ -1.61
RAD1	YPL022W	SSM4	P40318	1319 aa		5.01	□□□□□ -1.61
RAD1	YPL022W	MSH4	P40965	878 aa	Predicted RBP	5	□□□□□ -1.61
RAD1	YPL022W	MON2	P48563	1636 aa	Predicted RBP	5	□□□□□ -1.61
RAD1	YPL022W	CLB5	P30283	435 aa		5	□□□□□ -1.61
RAD1	YPL022W	TOP2	P06786	1428 aa	Known RBP	5	□□□□□ -1.61
RAD1	YPL022W	DSN1	P40568	576 aa		4.99	□□□□□ -1.61
RAD1	YPL022W	GRX3	Q03835	250 aa		4.99	□□□□□ -1.61
RAD1	YPL022W	MSH3	P25336	1018 aa		4.98	□□□□□ -1.61
RAD1	YPL022W	PLP2	Q12017	286 aa		4.98	□□□□□ -1.61
RAD1	YPL022W	RPN1	P38764	993 aa	Known RBP	4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms