Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 AC008550.1-201ENST00000511500 884 ntBASIC20.2■□□□□ 0.82
GCN1Q92616 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GCN1Q92616 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.19■□□□□ 0.82
GCN1Q92616 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
GCN1Q92616 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GCN1Q92616 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GCN1Q92616 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GCN1Q92616 AC091060.1-201ENST00000623524 1766 ntBASIC20.18■□□□□ 0.82
GCN1Q92616 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.18■□□□□ 0.82
GCN1Q92616 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.18■□□□□ 0.82
GCN1Q92616 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.18■□□□□ 0.82
GCN1Q92616 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
GCN1Q92616 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
GCN1Q92616 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GCN1Q92616 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
GCN1Q92616 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.18■□□□□ 0.82
GCN1Q92616 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GCN1Q92616 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.18■□□□□ 0.82
GCN1Q92616 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GCN1Q92616 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GCN1Q92616 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GCN1Q92616 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
GCN1Q92616 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GCN1Q92616 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
GCN1Q92616 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.16■□□□□ 0.82
GCN1Q92616 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.16■□□□□ 0.82
GCN1Q92616 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.16■□□□□ 0.82
GCN1Q92616 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GCN1Q92616 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.16■□□□□ 0.82
GCN1Q92616 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
GCN1Q92616 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
GCN1Q92616 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GCN1Q92616 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GCN1Q92616 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.15■□□□□ 0.82
GCN1Q92616 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GCN1Q92616 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GCN1Q92616 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GCN1Q92616 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
GCN1Q92616 AC007322.1-201ENST00000426983 750 ntBASIC20.14■□□□□ 0.82
GCN1Q92616 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
GCN1Q92616 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.14■□□□□ 0.81
GCN1Q92616 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GCN1Q92616 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GCN1Q92616 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GCN1Q92616 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.14■□□□□ 0.81
GCN1Q92616 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GCN1Q92616 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GCN1Q92616 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.14■□□□□ 0.81
GCN1Q92616 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GCN1Q92616 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GCN1Q92616 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.13■□□□□ 0.81
GCN1Q92616 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.13■□□□□ 0.81
GCN1Q92616 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GCN1Q92616 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GCN1Q92616 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
GCN1Q92616 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GCN1Q92616 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GCN1Q92616 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.12■□□□□ 0.81
GCN1Q92616 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GCN1Q92616 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GCN1Q92616 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
GCN1Q92616 AF201337.1-201ENST00000520239 748 ntBASIC20.12■□□□□ 0.81
GCN1Q92616 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GCN1Q92616 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
GCN1Q92616 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.12■□□□□ 0.81
GCN1Q92616 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
GCN1Q92616 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GCN1Q92616 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.11■□□□□ 0.81
GCN1Q92616 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.11■□□□□ 0.81
GCN1Q92616 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GCN1Q92616 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GCN1Q92616 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.11■□□□□ 0.81
GCN1Q92616 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.11■□□□□ 0.81
GCN1Q92616 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.11■□□□□ 0.81
GCN1Q92616 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GCN1Q92616 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GCN1Q92616 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GCN1Q92616 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
GCN1Q92616 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.1■□□□□ 0.81
GCN1Q92616 AC142381.4-202ENST00000563973 229 ntBASIC20.1■□□□□ 0.81
GCN1Q92616 AC133041.1-202ENST00000642053 222 ntBASIC20.1■□□□□ 0.81
GCN1Q92616 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.1■□□□□ 0.81
GCN1Q92616 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.1■□□□□ 0.81
GCN1Q92616 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.1■□□□□ 0.81
GCN1Q92616 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GCN1Q92616 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms