Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
VPS37AQ8NEZ2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.37■■□□□ 1.01
VPS37AQ8NEZ2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 MIR4508-201ENST00000584178 70 ntBASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS37AQ8NEZ2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 AL117328.2-201ENST00000624617 1940 ntBASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS37AQ8NEZ2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 AC233723.2-201ENST00000623798 2106 ntBASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
VPS37AQ8NEZ2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS37AQ8NEZ2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.33■■□□□ 1.01
VPS37AQ8NEZ2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.33■■□□□ 1.01
VPS37AQ8NEZ2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS37AQ8NEZ2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VPS37AQ8NEZ2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS37AQ8NEZ2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VPS37AQ8NEZ2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.32■■□□□ 1
VPS37AQ8NEZ2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 YBX1P4-201ENST00000392794 808 ntBASIC21.31■■□□□ 1
VPS37AQ8NEZ2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.31■■□□□ 1
VPS37AQ8NEZ2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.3■■□□□ 1
VPS37AQ8NEZ2 C1orf229-201ENST00000623686 2258 ntBASIC21.3■■□□□ 1
VPS37AQ8NEZ2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms