Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
EFCAB3Q8N7B9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 AC090877.2-201ENST00000558441 1738 ntBASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 C1orf229-201ENST00000623686 2258 ntBASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 KRT16P3-201ENST00000439127 1283 ntBASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.12■■□□□ 1.13
EFCAB3Q8N7B9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
EFCAB3Q8N7B9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.1■■□□□ 1.13
EFCAB3Q8N7B9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.09■■□□□ 1.13
EFCAB3Q8N7B9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.08■■□□□ 1.13
EFCAB3Q8N7B9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
EFCAB3Q8N7B9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.12
EFCAB3Q8N7B9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
EFCAB3Q8N7B9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 AC011551.1-201ENST00000614101 683 ntBASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
EFCAB3Q8N7B9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
EFCAB3Q8N7B9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
EFCAB3Q8N7B9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.05■■□□□ 1.12
EFCAB3Q8N7B9 AC120024.1-201ENST00000562672 995 ntBASIC22.05■■□□□ 1.12
EFCAB3Q8N7B9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
EFCAB3Q8N7B9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms