Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 CLDN5-201ENST00000403084 2357 ntBASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.74■■□□□ 1.39
SYCE1Q8N0S2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 DUX4L18-201ENST00000553347 1267 ntBASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 LINC00565-201ENST00000562710 2331 ntBASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYCE1Q8N0S2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 AF131216.4-201ENST00000638924 1588 ntBASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SYCE1Q8N0S2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 KRT18P24-201ENST00000344739 1156 ntBASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYCE1Q8N0S2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 AC004448.1-201ENST00000458332 883 ntBASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 THA1P-201ENST00000590384 1145 ntBASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 AC074183.2-201ENST00000623112 922 ntBASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SYCE1Q8N0S2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 MIR4281-201ENST00000580852 62 ntBASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 BHLHE23-202ENST00000612929 1109 ntBASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYCE1Q8N0S2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 AC242852.2-201ENST00000615738 1807 ntBASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 ABHD17AP5-201ENST00000580133 923 ntBASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 NTF6A-201ENST00000591175 560 ntBASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
SYCE1Q8N0S2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.67■■□□□ 1.38
SYCE1Q8N0S2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYCE1Q8N0S2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYCE1Q8N0S2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SYCE1Q8N0S2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms