Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.83■□□□□ 0.93
C9orf40Q8IXQ3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf40Q8IXQ3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.83■□□□□ 0.93
C9orf40Q8IXQ3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.83■□□□□ 0.93
C9orf40Q8IXQ3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.83■□□□□ 0.93
C9orf40Q8IXQ3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.83■□□□□ 0.93
C9orf40Q8IXQ3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C9orf40Q8IXQ3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.83■□□□□ 0.92
C9orf40Q8IXQ3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
C9orf40Q8IXQ3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 AC099791.2-201ENST00000605725 427 ntBASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf40Q8IXQ3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 AC079630.1-202ENST00000618127 1840 ntBASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.81■□□□□ 0.92
C9orf40Q8IXQ3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 AC144652.1-201ENST00000609974 1624 ntBASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf40Q8IXQ3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.79■□□□□ 0.92
C9orf40Q8IXQ3 AC006455.2-201ENST00000429931 906 ntBASIC20.79■□□□□ 0.92
C9orf40Q8IXQ3 AC241377.3-202ENST00000626088 1088 ntBASIC20.79■□□□□ 0.92
C9orf40Q8IXQ3 AC241585.3-202ENST00000628937 1088 ntBASIC20.79■□□□□ 0.92
C9orf40Q8IXQ3 AC245100.8-202ENST00000629247 1058 ntBASIC20.79■□□□□ 0.92
C9orf40Q8IXQ3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf40Q8IXQ3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
C9orf40Q8IXQ3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 ANOS2P-203ENST00000472227 1816 ntBASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 AC096631.2-201ENST00000436136 790 ntBASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 AC009086.3-201ENST00000623486 1008 ntBASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
C9orf40Q8IXQ3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
C9orf40Q8IXQ3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.77■□□□□ 0.91
C9orf40Q8IXQ3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.76■□□□□ 0.91
C9orf40Q8IXQ3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf40Q8IXQ3 AC092171.4-201ENST00000609130 632 ntBASIC20.76■□□□□ 0.91
C9orf40Q8IXQ3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.76■□□□□ 0.91
C9orf40Q8IXQ3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf40Q8IXQ3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf40Q8IXQ3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms