Protein–RNA interactions for Protein: Q6ZSJ9

SHISA6, Protein shisa-6 homolog, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6Q6ZSJ9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 ZNRF2P3-201ENST00000424200 374 ntBASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 MIR3181-201ENST00000578512 73 ntBASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA6Q6ZSJ9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHISA6Q6ZSJ9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SHISA6Q6ZSJ9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 AP001330.3-201ENST00000520123 633 ntBASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 pRNA.6-201ENST00000610482 90 ntBASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 pRNA.5-201ENST00000612139 90 ntBASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 pRNA.11-201ENST00000618423 90 ntBASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 pRNA.13-201ENST00000619112 90 ntBASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 AL136967.2-201ENST00000623968 743 ntBASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SHISA6Q6ZSJ9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 AC141586.4-201ENST00000624558 1573 ntBASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 AC008764.7-201ENST00000593779 1081 ntBASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.12■□□□□ 0.97
SHISA6Q6ZSJ9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 AC011298.3-201ENST00000615796 283 ntBASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHISA6Q6ZSJ9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 AL138724.1-201ENST00000606771 1088 ntBASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.1■□□□□ 0.97
SHISA6Q6ZSJ9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 MIR939-201ENST00000401314 82 ntBASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SHISA6Q6ZSJ9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 AC105265.2-201ENST00000467189 838 ntBASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SHISA6Q6ZSJ9 AC136469.2-201ENST00000623944 1028 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms