Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PDCD4Q53EL6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.57■■□□□ 1.04
PDCD4Q53EL6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDCD4Q53EL6 ESRRAP2-201ENST00000418437 1549 ntBASIC21.57■■□□□ 1.04
PDCD4Q53EL6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDCD4Q53EL6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDCD4Q53EL6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDCD4Q53EL6 AC079630.1-202ENST00000618127 1840 ntBASIC21.57■■□□□ 1.04
PDCD4Q53EL6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDCD4Q53EL6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDCD4Q53EL6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDCD4Q53EL6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 AC139795.1-202ENST00000500444 432 ntBASIC21.54■■□□□ 1.04
PDCD4Q53EL6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.54■■□□□ 1.04
PDCD4Q53EL6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 AC120024.1-201ENST00000562672 995 ntBASIC21.53■■□□□ 1.04
PDCD4Q53EL6 HSD17B1P1-201ENST00000590052 955 ntBASIC21.53■■□□□ 1.04
PDCD4Q53EL6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDCD4Q53EL6 AF131216.4-201ENST00000638924 1588 ntBASIC21.53■■□□□ 1.04
PDCD4Q53EL6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDCD4Q53EL6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.52■■□□□ 1.03
PDCD4Q53EL6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.52■■□□□ 1.03
PDCD4Q53EL6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.52■■□□□ 1.03
PDCD4Q53EL6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDCD4Q53EL6 AC242852.2-201ENST00000615738 1807 ntBASIC21.5■■□□□ 1.03
PDCD4Q53EL6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms