Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB1AP62820 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB1AP62820 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB1AP62820 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB1AP62820 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB1AP62820 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB1AP62820 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB1AP62820 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB1AP62820 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB1AP62820 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB1AP62820 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB1AP62820 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RAB1AP62820 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RAB1AP62820 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB1AP62820 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB1AP62820 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RAB1AP62820 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB1AP62820 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAB1AP62820 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RAB1AP62820 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB1AP62820 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB1AP62820 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.68■□□□□ 0.74
RAB1AP62820 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB1AP62820 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.68■□□□□ 0.74
RAB1AP62820 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB1AP62820 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB1AP62820 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB1AP62820 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB1AP62820 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB1AP62820 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB1AP62820 AC009102.2-201ENST00000606772 1639 ntBASIC19.67■□□□□ 0.74
RAB1AP62820 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB1AP62820 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB1AP62820 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB1AP62820 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB1AP62820 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB1AP62820 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB1AP62820 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB1AP62820 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB1AP62820 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB1AP62820 AC079834.2-201ENST00000609776 1949 ntBASIC19.66■□□□□ 0.74
RAB1AP62820 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB1AP62820 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAB1AP62820 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB1AP62820 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RAB1AP62820 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB1AP62820 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB1AP62820 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB1AP62820 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB1AP62820 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB1AP62820 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB1AP62820 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB1AP62820 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB1AP62820 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms