Protein–RNA interactions for Protein: P57073

SOX8, Transcription factor SOX-8, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX8P57073 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SOX8P57073 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SOX8P57073 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SOX8P57073 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.72■□□□□ 0.91
SOX8P57073 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SOX8P57073 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 DUX4L4-201ENST00000566884 1269 ntBASIC20.72■□□□□ 0.91
SOX8P57073 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.72■□□□□ 0.91
SOX8P57073 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SOX8P57073 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SOX8P57073 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SOX8P57073 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SOX8P57073 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.71■□□□□ 0.91
SOX8P57073 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SOX8P57073 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SOX8P57073 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SOX8P57073 AC133637.1-201ENST00000624115 1537 ntBASIC20.7■□□□□ 0.9
SOX8P57073 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SOX8P57073 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.7■□□□□ 0.9
SOX8P57073 IGHV3-19-201ENST00000521488 291 ntBASIC20.7■□□□□ 0.9
SOX8P57073 AL358852.1-201ENST00000623174 1268 ntBASIC20.7■□□□□ 0.9
SOX8P57073 TSPY26P-201ENST00000476365 1326 ntBASIC20.7■□□□□ 0.9
SOX8P57073 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.7■□□□□ 0.9
SOX8P57073 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SOX8P57073 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SOX8P57073 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX8P57073 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX8P57073 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SOX8P57073 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.69■□□□□ 0.9
SOX8P57073 AC034268.1-201ENST00000441047 882 ntBASIC20.69■□□□□ 0.9
SOX8P57073 YBX1P1-201ENST00000445822 960 ntBASIC20.69■□□□□ 0.9
SOX8P57073 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SOX8P57073 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.69■□□□□ 0.9
SOX8P57073 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.69■□□□□ 0.9
SOX8P57073 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SOX8P57073 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOX8P57073 MIR572-201ENST00000384983 95 ntBASIC20.68■□□□□ 0.9
SOX8P57073 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX8P57073 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.68■□□□□ 0.9
SOX8P57073 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX8P57073 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.68■□□□□ 0.9
SOX8P57073 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.68■□□□□ 0.9
SOX8P57073 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.68■□□□□ 0.9
SOX8P57073 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.68■□□□□ 0.9
SOX8P57073 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX8P57073 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.68■□□□□ 0.9
SOX8P57073 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX8P57073 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX8P57073 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX8P57073 AC027612.3-201ENST00000413684 1047 ntBASIC20.67■□□□□ 0.9
SOX8P57073 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.67■□□□□ 0.9
SOX8P57073 OR2I1P-207ENST00000453522 948 ntBASIC20.67■□□□□ 0.9
SOX8P57073 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SOX8P57073 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX8P57073 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX8P57073 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX8P57073 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.66■□□□□ 0.9
SOX8P57073 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX8P57073 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SOX8P57073 AC123595.1-201ENST00000440769 1046 ntBASIC20.66■□□□□ 0.9
SOX8P57073 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.66■□□□□ 0.9
SOX8P57073 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.66■□□□□ 0.9
SOX8P57073 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.66■□□□□ 0.9
SOX8P57073 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SOX8P57073 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX8P57073 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SOX8P57073 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX8P57073 AC142381.3-201ENST00000568208 1670 ntBASIC20.66■□□□□ 0.9
SOX8P57073 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX8P57073 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.65■□□□□ 0.9
SOX8P57073 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.65■□□□□ 0.9
SOX8P57073 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX8P57073 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SOX8P57073 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SOX8P57073 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX8P57073 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX8P57073 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX8P57073 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX8P57073 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.65■□□□□ 0.9
SOX8P57073 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms